STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AZC_2457Twin-arginine translocation pathway signal precursor. (355 aa)    
Predicted Functional Partners:
AZC_2455
Polyamine ABC transporter permease protein.
 
  
 0.961
AZC_2456
ABC transporter permease.
 
  
 0.961
AZC_2477
Binding-protein-dependent transport systems inner membrane component.
 
  
 0.920
AZC_2462
ABC transporter permease protein.
 
  
 0.900
AZC_2461
Spermidine/putrescine ABC transporter permease precursor.
 
  
 0.898
AZC_1800
ABC opine/polyamine transporter inner membrane subunit 2.
 
  
 0.850
AZC_1969
ABC transporter permease protein 1.
 
  
 0.850
AZC_1970
ABC transporter permease protein 2.
 
  
 0.850
AZC_2722
ABC transporter permease protein.
 
  
 0.849
AZC_1990
ABC transporter permease protein.
 
  
 0.847
Your Current Organism:
Azorhizobium caulinodans
NCBI taxonomy Id: 438753
Other names: A. caulinodans ORS 571, Azorhizobium caulinodans ORS 571, Azorhizobium caulinodans str. ORS 571, Azorhizobium caulinodans strain ORS 571, Rhizobium sp. ORS 571
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