STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AZC_2635With a C-terminal OMP (outer membrane protein) domain. (3766 aa)    
Predicted Functional Partners:
fhaC
Putative hemolysin activation/secretion protein.
 
   
 0.778
AZC_3234
Putative outer membrane autotransporter barrel.
  
     0.762
AZC_4384
TonB-dependent haem/haemoglobin receptor precursor.
 
 
 
 0.750
AZC_1359
Bacterial membrane protein of unknown function.
  
     0.743
AZC_1692
Putative protease.
 
     0.739
AZC_1301
Endoglucanase.
  
     0.718
AZC_1504
Putative serine protease; Outer membrane autotransporter precursor.
 
 
0.708
AZC_3227
Putative outer membrane autotransporter barrel precursor.
 
 
0.702
AZC_0980
Conserved hypothetical protein.
 
     0.698
AZC_4707
Highly conserved protein; Containing a thioredoxin domain.
    
 
 0.692
Your Current Organism:
Azorhizobium caulinodans
NCBI taxonomy Id: 438753
Other names: A. caulinodans ORS 571, Azorhizobium caulinodans ORS 571, Azorhizobium caulinodans str. ORS 571, Azorhizobium caulinodans strain ORS 571, Rhizobium sp. ORS 571
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