STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AZC_2687Ribulose-bisphosphate carboxylase; Belongs to the RuBisCO large chain family. (422 aa)    
Predicted Functional Partners:
AZC_2686
Type III effector Hrp-dependent outer protein; Hop.
 
   
 0.953
AZC_2688
Glyoxalase; Bleomycin resistance protein/dioxygenase superfamily protein.
 
     0.938
gph
2-phosphoglycolate phosphatase; Specifically catalyzes the dephosphorylation of 2- phosphoglycolate. Is involved in the dissimilation of the intracellular 2-phosphoglycolate formed during the DNA repair of 3'-phosphoglycolate ends, a major class of DNA lesions induced by oxidative stress. Belongs to the HAD-like hydrolase superfamily. CbbY/CbbZ/Gph/YieH family.
    
 0.925
AZC_1486
Putative phosphatase.
 
  
 0.922
AZC_2520
HAD-superfamily hydrolase; Subfamily IA, variant 1.
    
 0.910
lacI-3
Regulatory protein.
 
    0.858
AZC_3671
Putative acetyltransferase protein.
    
 
 0.831
AZC_1644
Putative phosphoserine phosphatase.
  
  
 0.742
AZC_3989
Phosphoserine phosphatase.
  
  
 0.742
AZC_2689
Tripartite ATP-independent periplasmic transporter.
       0.712
Your Current Organism:
Azorhizobium caulinodans
NCBI taxonomy Id: 438753
Other names: A. caulinodans ORS 571, Azorhizobium caulinodans ORS 571, Azorhizobium caulinodans str. ORS 571, Azorhizobium caulinodans strain ORS 571, Rhizobium sp. ORS 571
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