STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AZC_3608Conserved hypothetical protein; Surfeit locus 4-related. (144 aa)    
Predicted Functional Partners:
AZC_3100
Putative transmembrane protein.
 
     0.748
AZC_3091
Conserved hypothetical protein; Metallo-dependent hydrolase, composite.
 
     0.675
AZC_4412
Putative membrane protein.
  
     0.572
AZC_3101
Conserved hypothetical protein; Isochorismatase hydrolase.
 
    0.529
AZC_3609
HesB/YadR/YfhF; Belongs to the HesB/IscA family.
  
    0.456
AZC_1771
Conserved hypothetical protein; Beta-lactamase-like.
 
     0.442
AZC_3485
Protein of unknown function; DUF692; Belongs to the UPF0276 family.
  
  
 0.421
AZC_4164
Conserved hypothetical protein; Carbohydrate-binding family V/XII.
  
     0.418
AZC_3486
Hypothetical protein.
  
  
 0.416
Your Current Organism:
Azorhizobium caulinodans
NCBI taxonomy Id: 438753
Other names: A. caulinodans ORS 571, Azorhizobium caulinodans ORS 571, Azorhizobium caulinodans str. ORS 571, Azorhizobium caulinodans strain ORS 571, Rhizobium sp. ORS 571
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.