STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AZC_4223Histidine kinase; HAMP region precursor, protein phosphatase 2C-like. (682 aa)    
Predicted Functional Partners:
AZC_4215
Putative anti-sigma factor.
 
 
 0.956
AZC_4213
Anti-sigma factor antagonist; Belongs to the anti-sigma-factor antagonist family.
 
 
 0.947
AZC_4219
Putative Arabinose efflux permease precursor.
 
    0.880
AZC_4217
Hypothetical protein.
 
     0.852
AZC_4218
Putative ABC-type uncharacterized transport system periplasmic component precursor.
 
    0.830
AZC_0657
Hypothetical protein.
   
    0.806
AZC_4679
Proble transcriptional regulator.
 
 
 0.792
AZC_4222
Hypothetical protein.
       0.773
AZC_4221
Hypothetical protein.
       0.754
AZC_2213
Protein of unknown function; DUF140.
  
 
 0.740
Your Current Organism:
Azorhizobium caulinodans
NCBI taxonomy Id: 438753
Other names: A. caulinodans ORS 571, Azorhizobium caulinodans ORS 571, Azorhizobium caulinodans str. ORS 571, Azorhizobium caulinodans strain ORS 571, Rhizobium sp. ORS 571
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.