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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dalk_0484PFAM: Ankyrin; KEGG: hypothetical protein; IMG reference gene:2503006184; PFAM: Ankyrin repeat. (275 aa)    
Predicted Functional Partners:
Dalk_1951
Putative signal transduction protein with EFhand domain; SMART: Calcium-binding EF-hand-containing protein; KEGG: rle:pRL120065 putative symbiosis-related calsymin; IMG reference gene:2503007668.
  
 
 0.947
Dalk_4362
PFAM: AAA ATPase central domain protein; SMART: AAA ATPase; KEGG: scl:sce5713 cell division cycle protein 48-related protein; IMG reference gene:2503010110; PFAM: ATPase family associated with various cellular activities (AAA).
  
 
 0.936
Dalk_4028
SMART: SET-related domain protein; KEGG: bte:BTH_II2089 hypothetical protein; IMG reference gene:2503009773.
    
 0.932
Dalk_1909
KEGG: dol:Dole_0714 ribosomal protein S3; TIGRFAM: ribosomal protein S3; PFAM: ribosomal protein S3- domain protein; KH type 2 domain protein; Ribosomal protein S3 domain; SMART: KH domain protein; IMG reference gene:2503007621; PFAM: KH domain; Ribosomal protein S3, C-terminal domain; Ribosomal protein S3, N-terminal domain; TIGRFAM: ribosomal protein S3, bacterial type.
    
 0.927
Dalk_1218
KEGG: oan:Oant_2946 hypothetical protein; IMG reference gene:2503006921.
    
 0.925
Dalk_2931
TIGRFAM: sulfate transporter; PFAM: response regulator receiver; Sulfate transporter/antisigma-factor antagonist STAS; sulphate transporter; KEGG: dde:Dde_3641 sulfate permease; IMG reference gene:2503008657; PFAM: Response regulator receiver domain; Sulfate transporter family; STAS domain.
    
 0.925
Dalk_3029
KEGG: gur:Gura_0598 non-specific serine/threonine protein kinase; PFAM: SNF2-related protein; helicase domain protein; SMART: DEAD-like helicases; IMG reference gene:2503008756; PFAM: SNF2 Helicase protein; Helicase conserved C-terminal domain; SNF2 family N-terminal domain.
    
 0.921
Dalk_2599
TIGRFAM: glycerol kinase; PFAM: carbohydrate kinase FGGY; KEGG: ank:AnaeK_3540 glycerol kinase; IMG reference gene:2503008320; PFAM: FGGY family of carbohydrate kinases, N-terminal domain; FGGY family of carbohydrate kinases, C-terminal domain; TIGRFAM: glycerol kinase.
   
 0.916
Dalk_3887
KEGG: sat:SYN_02852 ATP-dependent helicase; TIGRFAM: ATP-dependent helicase HrpA; PFAM: helicase domain protein; helicase-associated domain protein; protein of unknown function DUF1605; SMART: DEAD-like helicases; IMG reference gene:2503009631; PFAM: Helicase conserved C-terminal domain; Helicase associated domain (HA2); Domain of unknown function (DUF3418); DEAD/DEAH box helicase; Domain of unknown function (DUF1605); TIGRFAM: ATP-dependent helicase HrpA.
    
 0.916
Dalk_2764
Enolase (Phosphopyruvate hydratase); PFAM: enolase; KEGG: dol:Dole_0339 phosphopyruvate hydratase; IMG reference gene:2503008487; PFAM: Enolase, N-terminal domain; Enolase, C-terminal TIM barrel domain; TIGRFAM: phosphopyruvate hydratase.
   
 0.914
Your Current Organism:
Desulfatibacillum alkenivorans AK01
NCBI taxonomy Id: 439235
Other names: D. alkenivorans AK-01, Desulfatibacillum alkenivorans AK-01, Desulfatibacillum alkenivorans str. AK-01, Desulfatibacillum alkenivorans strain AK-01
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