STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dalk_1023PFAM: phosphoglucose isomerase (PGI); KEGG: sfu:Sfum_3591 phosphoglucose isomerase (PGI); IMG reference gene:2503006724; PFAM: Phosphoglucose isomerase. (549 aa)    
Predicted Functional Partners:
Dalk_1022
6-Phosphofructokinase; PFAM: phosphofructokinase; KEGG: dol:Dole_0860 6-phosphofructokinase; IMG reference gene:2503006723; PFAM: Phosphofructokinase; TIGRFAM: phosphofructokinase.
  
 0.994
Dalk_1354
PFAM: triosephosphate isomerase; KEGG: dol:Dole_0499 triose-phosphate isomerase; IMG reference gene:2503007059; PFAM: Triosephosphate isomerase; TIGRFAM: triosephosphate isomerase.
  
 0.994
Dalk_3774
KEGG: pth:PTH_2214 pyruvate kinase; TIGRFAM: pyruvate kinase; PFAM: Pyruvate kinase barrel; Pyruvate kinase alpha/beta; IMG reference gene:2503009518; PFAM: Pyruvate kinase, barrel domain; Pyruvate kinase, alpha/beta domain; TIGRFAM: pyruvate kinase.
  
 
 0.992
Dalk_1355
KEGG: chy:CHY_0280 glyceraldehyde-3-phosphate dehydrogenase, type I; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; PFAM: glyceraldehyde 3-phosphate dehydrogenase; IMG reference gene:2503007060; PFAM: Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain; Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I.
  
 
 0.990
Dalk_2764
Enolase (Phosphopyruvate hydratase); PFAM: enolase; KEGG: dol:Dole_0339 phosphopyruvate hydratase; IMG reference gene:2503008487; PFAM: Enolase, N-terminal domain; Enolase, C-terminal TIM barrel domain; TIGRFAM: phosphopyruvate hydratase.
  
 0.989
Dalk_1968
Phosphoglucomutase, alpha-D-glucose phosphate-specific; Catalyzes the interconversion of alpha-D-glucose 1-phosphate to alpha-D-glucose 6-phosphate; IMG reference gene:2503007685; PFAM: Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III; Phosphoglucomutase/phosphomannomutase, C-terminal domain; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I; TIGRFAM: phosphoglucomutase, alpha-D-glucose phosphate-specific.
 
 0.987
Dalk_5159
PFAM: ketose-bisphosphate aldolase class-II; KEGG: gur:Gura_3299 fructose/tagatose bisphosphate aldolase-like protein; IMG reference gene:2503010918; PFAM: Fructose-bisphosphate aldolase class-II.
  
 
 0.983
Dalk_2752
Transketolase family protein; TIGRFAM: transketolase; PFAM: Transketolase domain protein; Transketolase central region; KEGG: dol:Dole_0367 transketolase; IMG reference gene:2503008475; PFAM: Transketolase, thiamine diphosphate binding domain; Transketolase, C-terminal domain; Transketolase, pyrimidine binding domain; TIGRFAM: transketolase, bacterial and yeast.
 
 0.978
Dalk_3448
Pyrophosphate-fructose 6-phosphate 1-phosphotransferase; Catalyzes the formation of fructose 1,6-bisphosphate from fructose 6-phosphate and diphosphate; IMG reference gene:2503009180; PFAM: Phosphofructokinase.
  
 0.974
Dalk_1490
KEGG: pca:Pcar_1794 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; PFAM: mannose-6-phosphate isomerase type II; Nucleotidyl transferase; Cupin 2 conserved barrel domain protein; IMG reference gene:2503007200; PFAM: Nucleotidyl transferase; Mannose-6-phosphate isomerase; TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase.
  
 
 0.966
Your Current Organism:
Desulfatibacillum alkenivorans AK01
NCBI taxonomy Id: 439235
Other names: D. alkenivorans AK-01, Desulfatibacillum alkenivorans AK-01, Desulfatibacillum alkenivorans str. AK-01, Desulfatibacillum alkenivorans strain AK-01
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