STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dalk_1666KEGG: nmu:Nmul_A0431 hypothetical protein; IMG reference gene:2503007376. (426 aa)    
Predicted Functional Partners:
Dalk_1665
KEGG: pmh:P9215_14611 hypothetical protein; IMG reference gene:2503007375; PFAM: Capsule polysaccharide biosynthesis protein.
       0.773
Dalk_1668
PFAM: glycosyl transferase family 2; KEGG: syn:slr2120 hypothetical protein; IMG reference gene:2503007378; PFAM: Cytidylyltransferase; Glycosyl transferase family 2.
       0.748
Dalk_1669
Acetyltransferase (isoleucine patch superfamily)-like protein; KEGG: mmx:MmarC6_0587 acetyltransferase; IMG reference gene:2503007379; PFAM: Bacterial transferase hexapeptide (three repeats).
       0.718
Dalk_1664
PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: mth:MTH970 D-3-phosphoglycerate dehydrogenase; IMG reference gene:2503007374; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain.
       0.705
Dalk_1667
PFAM: dihydrodipicolinate synthetase; KEGG: cpo:COPRO5265_1180 dihydrodipicolinate synthase (DHDPS); IMG reference gene:2503007377; PFAM: Dihydrodipicolinate synthetase family.
  
    0.703
Dalk_0987
TIGRFAM: flagellar hook-associated protein FlgK; PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; KEGG: mgm:Mmc1_0079 flagellar hook-associated protein FlgK; IMG reference gene:2503006688; PFAM: Domain of unknown function (DUF1078); Flagella basal body rod protein; TIGRFAM: flagellar hook-associated protein FlgK.
  
    0.597
Dalk_1671
PFAM: acylneuraminate cytidylyltransferase; KEGG: gur:Gura_4089 acylneuraminate cytidylyltransferase; IMG reference gene:2503007381; PFAM: Cytidylyltransferase.
       0.587
Dalk_1663
PFAM: acylneuraminate cytidylyltransferase; KEGG: cbl:CLK_2102 N-acylneuraminate cytidylyltransferase (CMP-N-acetylneuraminic acid synthetase) (CMP-NeuNAc synthetase); IMG reference gene:2503007373; PFAM: Cytidylyltransferase.
       0.568
Dalk_1670
PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: cac:CAC1072 Fe-S oxidoreductase; IMG reference gene:2503007380; PFAM: Radical SAM superfamily; B12 binding domain.
       0.568
Dalk_1661
PFAM: N-acetylneuraminic acid synthase domain; SAF domain protein; KEGG: cth:Cthe_2641 N-acetylneuraminate synthase; IMG reference gene:2503007371; PFAM: SAF domain; NeuB family.
  
  
 0.549
Your Current Organism:
Desulfatibacillum alkenivorans AK01
NCBI taxonomy Id: 439235
Other names: D. alkenivorans AK-01, Desulfatibacillum alkenivorans AK-01, Desulfatibacillum alkenivorans str. AK-01, Desulfatibacillum alkenivorans strain AK-01
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.