STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dalk_2764Enolase (Phosphopyruvate hydratase); PFAM: enolase; KEGG: dol:Dole_0339 phosphopyruvate hydratase; IMG reference gene:2503008487; PFAM: Enolase, N-terminal domain; Enolase, C-terminal TIM barrel domain; TIGRFAM: phosphopyruvate hydratase. (428 aa)    
Predicted Functional Partners:
Dalk_1355
KEGG: chy:CHY_0280 glyceraldehyde-3-phosphate dehydrogenase, type I; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; PFAM: glyceraldehyde 3-phosphate dehydrogenase; IMG reference gene:2503007060; PFAM: Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain; Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I.
 
 0.997
Dalk_3774
KEGG: pth:PTH_2214 pyruvate kinase; TIGRFAM: pyruvate kinase; PFAM: Pyruvate kinase barrel; Pyruvate kinase alpha/beta; IMG reference gene:2503009518; PFAM: Pyruvate kinase, barrel domain; Pyruvate kinase, alpha/beta domain; TIGRFAM: pyruvate kinase.
 
 0.996
Dalk_1714
Phosphoglycerate mutase (GpmB protein); Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate; IMG reference gene:2503007424; PFAM: Metalloenzyme superfamily; BPG-independent PGAM N-terminus (iPGM_N); TIGRFAM: 2,3-bisphosphoglycerate-independent phosphoglycerate mutase.
  
 0.994
Dalk_0617
PFAM: phosphoglycerate kinase; KEGG: gsu:GSU1628 phosphoglycerate kinase/triosephosphate isomerase; IMG reference gene:2503006318; PFAM: Phosphoglycerate kinase.
 
 
 0.991
Dalk_1354
PFAM: triosephosphate isomerase; KEGG: dol:Dole_0499 triose-phosphate isomerase; IMG reference gene:2503007059; PFAM: Triosephosphate isomerase; TIGRFAM: triosephosphate isomerase.
 
 
 0.991
Dalk_1023
PFAM: phosphoglucose isomerase (PGI); KEGG: sfu:Sfum_3591 phosphoglucose isomerase (PGI); IMG reference gene:2503006724; PFAM: Phosphoglucose isomerase.
  
 0.989
Dalk_1914
PFAM: ribosomal protein L4/L1e; KEGG: dol:Dole_0709 ribosomal protein L4/L1e; IMG reference gene:2503007626; PFAM: Ribosomal protein L4/L1 family; TIGRFAM: 50S ribosomal protein L4, bacterial/organelle.
  
 
 0.987
Dalk_0244
PFAM: phosphoglycerate kinase; KEGG: hypothetical protein; IMG reference gene:2503005940; PFAM: Phosphoglycerate kinase.
 
 
 0.982
Dalk_5159
PFAM: ketose-bisphosphate aldolase class-II; KEGG: gur:Gura_3299 fructose/tagatose bisphosphate aldolase-like protein; IMG reference gene:2503010918; PFAM: Fructose-bisphosphate aldolase class-II.
  
 0.978
Dalk_1192
TIGRFAM: ribonuclease, Rne/Rng family; PFAM: RNA binding S1 domain protein; ribonuclease E and G; KEGG: dol:Dole_2439 ribonuclease; IMG reference gene:2503006894; PFAM: Ribonuclease E/G family; S1 RNA binding domain; TIGRFAM: ribonuclease, Rne/Rng family.
   
 0.972
Your Current Organism:
Desulfatibacillum alkenivorans AK01
NCBI taxonomy Id: 439235
Other names: D. alkenivorans AK-01, Desulfatibacillum alkenivorans AK-01, Desulfatibacillum alkenivorans str. AK-01, Desulfatibacillum alkenivorans strain AK-01
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.