STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dalk_2916PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bbr:BB2758 ATP-binding component of ABC transporter protein; IMG reference gene:2503008642; PFAM: ABC transporter. (250 aa)    
Predicted Functional Partners:
Dalk_2917
PFAM: inner-membrane translocator; KEGG: mpo:Mpop_3556 inner-membrane translocator; IMG reference gene:2503008643; PFAM: Branched-chain amino acid transport system / permease component.
 
 0.996
Dalk_3103
PFAM: inner-membrane translocator; KEGG: kcr:Kcr_1254 ABC-type branched-chain amino acid transport system, permease component; IMG reference gene:2503008832; PFAM: Branched-chain amino acid transport system / permease component.
 
 0.983
Dalk_4902
PFAM: inner-membrane translocator; KEGG: cau:Caur_3638 inner-membrane translocator; IMG reference gene:2503010660; PFAM: Branched-chain amino acid transport system / permease component.
 
 0.983
Dalk_0701
PFAM: inner-membrane translocator; KEGG: kcr:Kcr_1254 ABC-type branched-chain amino acid transport system, permease component; IMG reference gene:2503006402; PFAM: Branched-chain amino acid transport system / permease component.
 
 0.981
Dalk_1707
PFAM: inner-membrane translocator; KEGG: sfu:Sfum_1679 inner-membrane translocator; IMG reference gene:2503007417; PFAM: Branched-chain amino acid transport system / permease component.
 
 0.981
Dalk_1990
PFAM: inner-membrane translocator; KEGG: stp:Strop_1805 inner-membrane translocator; IMG reference gene:2503007707; PFAM: Branched-chain amino acid transport system / permease component.
 
 0.980
Dalk_0069
PFAM: inner-membrane translocator; KEGG: rfr:Rfer_3500 inner-membrane translocator; IMG reference gene:2503005764; PFAM: Branched-chain amino acid transport system / permease component.
 
 0.977
Dalk_3504
PFAM: inner-membrane translocator; KEGG: dol:Dole_3011 inner-membrane translocator; IMG reference gene:2503009236; PFAM: Branched-chain amino acid transport system / permease component.
 
 0.977
Dalk_2918
PFAM: inner-membrane translocator; KEGG: bpt:Bpet1185 putative branched-chain amino acid transport permease; IMG reference gene:2503008644; PFAM: Branched-chain amino acid transport system / permease component.
 
 0.974
Dalk_5053
PFAM: ABC-2 type transporter; KEGG: tcx:Tcr_1135 hypothetical protein; IMG reference gene:2503010812; PFAM: ABC-2 type transporter.
 
   
  0.971
Your Current Organism:
Desulfatibacillum alkenivorans AK01
NCBI taxonomy Id: 439235
Other names: D. alkenivorans AK-01, Desulfatibacillum alkenivorans AK-01, Desulfatibacillum alkenivorans str. AK-01, Desulfatibacillum alkenivorans strain AK-01
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