STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dalk_4065PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mma:MM_1996 cobalt transport ATP-binding protein; IMG reference gene:2503009810; PFAM: ABC transporter. (571 aa)    
Predicted Functional Partners:
Dalk_4068
PFAM: cobalt transport protein; KEGG: mma:MM_1995 cobalt transport protein; IMG reference gene:2503009813; PFAM: Cobalt transport protein.
 
 0.995
Dalk_0870
PFAM: binding-protein-dependent transport systems inner membrane component; ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; KEGG: mac:MA2480 peptide ABC transporter, permease protein; IMG reference gene:2503006571; PFAM: ABC transporter; Binding-protein-dependent transport system inner membrane component; Oligopeptide/dipeptide transporter, C-terminal region; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain.
 
 
0.984
Dalk_0379
PFAM: cobalt transport protein; KEGG: mac:MA4343 cobalt transport family protein; IMG reference gene:2503006076; PFAM: Cobalt transport protein.
 
 0.975
Dalk_2005
TIGRFAM: cobalt ABC transporter, inner membrane subunit CbiQ; PFAM: cobalt transport protein; KEGG: dol:Dole_2020 cobalt ABC transporter, inner membrane subunit CbiQ; IMG reference gene:2503007722; PFAM: Cobalt transport protein; TIGRFAM: cobalt ABC transporter, permease protein CbiQ.
  
 0.967
Dalk_0378
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sfu:Sfum_1750 cobalt ABC transporter, ATPase subunit; IMG reference gene:2503006075; PFAM: ABC transporter.
 
0.918
Dalk_2006
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: dvl:Dvul_1938 ABC transporter related; IMG reference gene:2503007723; PFAM: ABC transporter.
 
0.908
Dalk_0264
KEGG: chy:CHY_1126 oligopeptide/dipeptide ABC transporter, ATP-binding protein; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; IMG reference gene:2503005960; PFAM: ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain.
 
 
0.872
Dalk_0965
Oligopeptide/dipeptide ABC transporter, ATPase subunit; KEGG: sth:STH2824 oligopeptide ABC transporter ATP-binding protein; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; IMG reference gene:2503006666; PFAM: ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain.
 
 
0.871
Dalk_1531
KEGG: dvl:Dvul_2802 oligopeptide/dipeptide ABC transporter, ATPase subunit; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; IMG reference gene:2503007241; PFAM: ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain.
 
 
0.869
Dalk_1530
KEGG: dvl:Dvul_2803 oligopeptide/dipeptide ABC transporter, ATPase subunit; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; IMG reference gene:2503007240; PFAM: ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain.
 
 
0.867
Your Current Organism:
Desulfatibacillum alkenivorans AK01
NCBI taxonomy Id: 439235
Other names: D. alkenivorans AK-01, Desulfatibacillum alkenivorans AK-01, Desulfatibacillum alkenivorans str. AK-01, Desulfatibacillum alkenivorans strain AK-01
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