node1 | node2 | node1 annotation | node2 annotation | score |
Dalk_1889 | Dalk_1890 | KEGG: dol:Dole_0733 DNA-directed RNA polymerase, alpha subunit; TIGRFAM: DNA-directed RNA polymerase, alpha subunit; PFAM: RNA polymerase alpha subunit domain protein; RNA polymerase dimerisation; RNA polymerase insert; SMART: RNA polymerase RpoA/D/Rpb3-type; IMG reference gene:2503007601; PFAM: RNA polymerase Rpb3/Rpb11 dimerisation domain; RNA polymerase Rpb3/RpoA insert domain; Bacterial RNA polymerase, alpha chain C terminal domain; TIGRFAM: DNA-directed RNA polymerase, alpha subunit, bacterial and chloroplast-type. | PFAM: ribosomal protein S4; RNA-binding S4 domain protein; KEGG: gsu:GSU2832 30S ribosomal protein S4; IMG reference gene:2503007602; PFAM: Ribosomal protein S4/S9 N-terminal domain; S4 domain; TIGRFAM: ribosomal protein S4, bacterial/organelle type. | 0.999 |
Dalk_1889 | Dalk_1915 | KEGG: dol:Dole_0733 DNA-directed RNA polymerase, alpha subunit; TIGRFAM: DNA-directed RNA polymerase, alpha subunit; PFAM: RNA polymerase alpha subunit domain protein; RNA polymerase dimerisation; RNA polymerase insert; SMART: RNA polymerase RpoA/D/Rpb3-type; IMG reference gene:2503007601; PFAM: RNA polymerase Rpb3/Rpb11 dimerisation domain; RNA polymerase Rpb3/RpoA insert domain; Bacterial RNA polymerase, alpha chain C terminal domain; TIGRFAM: DNA-directed RNA polymerase, alpha subunit, bacterial and chloroplast-type. | PFAM: ribosomal protein L3; KEGG: dol:Dole_0708 ribosomal protein L3; IMG reference gene:2503007627; PFAM: Ribosomal protein L3; TIGRFAM: 50S ribosomal protein L3, bacterial. | 0.996 |
Dalk_1889 | Dalk_1921 | KEGG: dol:Dole_0733 DNA-directed RNA polymerase, alpha subunit; TIGRFAM: DNA-directed RNA polymerase, alpha subunit; PFAM: RNA polymerase alpha subunit domain protein; RNA polymerase dimerisation; RNA polymerase insert; SMART: RNA polymerase RpoA/D/Rpb3-type; IMG reference gene:2503007601; PFAM: RNA polymerase Rpb3/Rpb11 dimerisation domain; RNA polymerase Rpb3/RpoA insert domain; Bacterial RNA polymerase, alpha chain C terminal domain; TIGRFAM: DNA-directed RNA polymerase, alpha subunit, bacterial and chloroplast-type. | TIGRFAM: DNA-directed RNA polymerase, beta subunit; PFAM: RNA polymerase Rpb2 domain 6; RNA polymerase Rpb2 domain 7; RNA polymerase Rpb2 domain 2; RNA polymerase beta subunit; RNA polymerase Rpb2 domain 3; DNA-directed RNA polymerase beta subunit; KEGG: dol:Dole_0702 DNA-directed RNA polymerase, beta subunit; IMG reference gene:2503007633; PFAM: RNA polymerase Rpb2, domain 3; RNA polymerase Rpb2, domain 6; RNA polymerase beta subunit external 1 domain; RNA polymerase Rpb2, domain 2; RNA polymerase beta subunit; RNA polymerase Rpb2, domain 7; TIGRFAM: DNA-directed RNA polymerase, beta [...] | 0.999 |
Dalk_1889 | Dalk_3165 | KEGG: dol:Dole_0733 DNA-directed RNA polymerase, alpha subunit; TIGRFAM: DNA-directed RNA polymerase, alpha subunit; PFAM: RNA polymerase alpha subunit domain protein; RNA polymerase dimerisation; RNA polymerase insert; SMART: RNA polymerase RpoA/D/Rpb3-type; IMG reference gene:2503007601; PFAM: RNA polymerase Rpb3/Rpb11 dimerisation domain; RNA polymerase Rpb3/RpoA insert domain; Bacterial RNA polymerase, alpha chain C terminal domain; TIGRFAM: DNA-directed RNA polymerase, alpha subunit, bacterial and chloroplast-type. | PFAM: ribosomal protein S2; KEGG: dol:Dole_0474 ribosomal protein S2; IMG reference gene:2503008894; PFAM: Ribosomal protein S2; TIGRFAM: ribosomal protein S2, bacterial type. | 0.999 |
Dalk_1889 | Dalk_4644 | KEGG: dol:Dole_0733 DNA-directed RNA polymerase, alpha subunit; TIGRFAM: DNA-directed RNA polymerase, alpha subunit; PFAM: RNA polymerase alpha subunit domain protein; RNA polymerase dimerisation; RNA polymerase insert; SMART: RNA polymerase RpoA/D/Rpb3-type; IMG reference gene:2503007601; PFAM: RNA polymerase Rpb3/Rpb11 dimerisation domain; RNA polymerase Rpb3/RpoA insert domain; Bacterial RNA polymerase, alpha chain C terminal domain; TIGRFAM: DNA-directed RNA polymerase, alpha subunit, bacterial and chloroplast-type. | PFAM: ribosomal protein L19; KEGG: sat:SYN_00770 50S ribosomal protein L19; IMG reference gene:2503010400; PFAM: Ribosomal protein L19; TIGRFAM: ribosomal protein L19, bacterial type. | 0.989 |
Dalk_1889 | Dalk_4646 | KEGG: dol:Dole_0733 DNA-directed RNA polymerase, alpha subunit; TIGRFAM: DNA-directed RNA polymerase, alpha subunit; PFAM: RNA polymerase alpha subunit domain protein; RNA polymerase dimerisation; RNA polymerase insert; SMART: RNA polymerase RpoA/D/Rpb3-type; IMG reference gene:2503007601; PFAM: RNA polymerase Rpb3/Rpb11 dimerisation domain; RNA polymerase Rpb3/RpoA insert domain; Bacterial RNA polymerase, alpha chain C terminal domain; TIGRFAM: DNA-directed RNA polymerase, alpha subunit, bacterial and chloroplast-type. | KEGG: dol:Dole_2306 tRNA (guanine-N1)-methyltransferase; TIGRFAM: tRNA (guanine-N1)-methyltransferase; PFAM: tRNA (guanine-N1-)-methyltransferase; IMG reference gene:2503010402; PFAM: tRNA (Guanine-1)-methyltransferase; TIGRFAM: tRNA (guanine-N1)-methyltransferase. | 0.952 |
Dalk_1889 | Dalk_4647 | KEGG: dol:Dole_0733 DNA-directed RNA polymerase, alpha subunit; TIGRFAM: DNA-directed RNA polymerase, alpha subunit; PFAM: RNA polymerase alpha subunit domain protein; RNA polymerase dimerisation; RNA polymerase insert; SMART: RNA polymerase RpoA/D/Rpb3-type; IMG reference gene:2503007601; PFAM: RNA polymerase Rpb3/Rpb11 dimerisation domain; RNA polymerase Rpb3/RpoA insert domain; Bacterial RNA polymerase, alpha chain C terminal domain; TIGRFAM: DNA-directed RNA polymerase, alpha subunit, bacterial and chloroplast-type. | TIGRFAM: 16S rRNA processing protein RimM; PFAM: RimM protein; PRC-barrel domain protein; KEGG: gbm:Gbem_3429 16S rRNA processing protein RimM; IMG reference gene:2503010403; PFAM: PRC-barrel domain; RimM N-terminal domain; TIGRFAM: 16S rRNA processing protein RimM. | 0.949 |
Dalk_1889 | Dalk_4649 | KEGG: dol:Dole_0733 DNA-directed RNA polymerase, alpha subunit; TIGRFAM: DNA-directed RNA polymerase, alpha subunit; PFAM: RNA polymerase alpha subunit domain protein; RNA polymerase dimerisation; RNA polymerase insert; SMART: RNA polymerase RpoA/D/Rpb3-type; IMG reference gene:2503007601; PFAM: RNA polymerase Rpb3/Rpb11 dimerisation domain; RNA polymerase Rpb3/RpoA insert domain; Bacterial RNA polymerase, alpha chain C terminal domain; TIGRFAM: DNA-directed RNA polymerase, alpha subunit, bacterial and chloroplast-type. | PFAM: ribosomal protein S16; KEGG: lme:LEUM_1485 SSU ribosomal protein S16P; IMG reference gene:2503010405; PFAM: Ribosomal protein S16; TIGRFAM: ribosomal protein S16. | 0.996 |
Dalk_1889 | Dalk_4737 | KEGG: dol:Dole_0733 DNA-directed RNA polymerase, alpha subunit; TIGRFAM: DNA-directed RNA polymerase, alpha subunit; PFAM: RNA polymerase alpha subunit domain protein; RNA polymerase dimerisation; RNA polymerase insert; SMART: RNA polymerase RpoA/D/Rpb3-type; IMG reference gene:2503007601; PFAM: RNA polymerase Rpb3/Rpb11 dimerisation domain; RNA polymerase Rpb3/RpoA insert domain; Bacterial RNA polymerase, alpha chain C terminal domain; TIGRFAM: DNA-directed RNA polymerase, alpha subunit, bacterial and chloroplast-type. | NusA antitermination factor; Modifies transcription through interactions with RNA polymerase affecting elongation, readthrough, termination, and antitermination; IMG reference gene:2503010494; PFAM: NusA N-terminal domain; S1 RNA binding domain; TIGRFAM: transcription termination factor NusA; transcription termination factor NusA, C-terminal duplication. | 0.999 |
Dalk_1890 | Dalk_1889 | PFAM: ribosomal protein S4; RNA-binding S4 domain protein; KEGG: gsu:GSU2832 30S ribosomal protein S4; IMG reference gene:2503007602; PFAM: Ribosomal protein S4/S9 N-terminal domain; S4 domain; TIGRFAM: ribosomal protein S4, bacterial/organelle type. | KEGG: dol:Dole_0733 DNA-directed RNA polymerase, alpha subunit; TIGRFAM: DNA-directed RNA polymerase, alpha subunit; PFAM: RNA polymerase alpha subunit domain protein; RNA polymerase dimerisation; RNA polymerase insert; SMART: RNA polymerase RpoA/D/Rpb3-type; IMG reference gene:2503007601; PFAM: RNA polymerase Rpb3/Rpb11 dimerisation domain; RNA polymerase Rpb3/RpoA insert domain; Bacterial RNA polymerase, alpha chain C terminal domain; TIGRFAM: DNA-directed RNA polymerase, alpha subunit, bacterial and chloroplast-type. | 0.999 |
Dalk_1890 | Dalk_1915 | PFAM: ribosomal protein S4; RNA-binding S4 domain protein; KEGG: gsu:GSU2832 30S ribosomal protein S4; IMG reference gene:2503007602; PFAM: Ribosomal protein S4/S9 N-terminal domain; S4 domain; TIGRFAM: ribosomal protein S4, bacterial/organelle type. | PFAM: ribosomal protein L3; KEGG: dol:Dole_0708 ribosomal protein L3; IMG reference gene:2503007627; PFAM: Ribosomal protein L3; TIGRFAM: 50S ribosomal protein L3, bacterial. | 0.999 |
Dalk_1890 | Dalk_1921 | PFAM: ribosomal protein S4; RNA-binding S4 domain protein; KEGG: gsu:GSU2832 30S ribosomal protein S4; IMG reference gene:2503007602; PFAM: Ribosomal protein S4/S9 N-terminal domain; S4 domain; TIGRFAM: ribosomal protein S4, bacterial/organelle type. | TIGRFAM: DNA-directed RNA polymerase, beta subunit; PFAM: RNA polymerase Rpb2 domain 6; RNA polymerase Rpb2 domain 7; RNA polymerase Rpb2 domain 2; RNA polymerase beta subunit; RNA polymerase Rpb2 domain 3; DNA-directed RNA polymerase beta subunit; KEGG: dol:Dole_0702 DNA-directed RNA polymerase, beta subunit; IMG reference gene:2503007633; PFAM: RNA polymerase Rpb2, domain 3; RNA polymerase Rpb2, domain 6; RNA polymerase beta subunit external 1 domain; RNA polymerase Rpb2, domain 2; RNA polymerase beta subunit; RNA polymerase Rpb2, domain 7; TIGRFAM: DNA-directed RNA polymerase, beta [...] | 0.996 |
Dalk_1890 | Dalk_3165 | PFAM: ribosomal protein S4; RNA-binding S4 domain protein; KEGG: gsu:GSU2832 30S ribosomal protein S4; IMG reference gene:2503007602; PFAM: Ribosomal protein S4/S9 N-terminal domain; S4 domain; TIGRFAM: ribosomal protein S4, bacterial/organelle type. | PFAM: ribosomal protein S2; KEGG: dol:Dole_0474 ribosomal protein S2; IMG reference gene:2503008894; PFAM: Ribosomal protein S2; TIGRFAM: ribosomal protein S2, bacterial type. | 0.999 |
Dalk_1890 | Dalk_4644 | PFAM: ribosomal protein S4; RNA-binding S4 domain protein; KEGG: gsu:GSU2832 30S ribosomal protein S4; IMG reference gene:2503007602; PFAM: Ribosomal protein S4/S9 N-terminal domain; S4 domain; TIGRFAM: ribosomal protein S4, bacterial/organelle type. | PFAM: ribosomal protein L19; KEGG: sat:SYN_00770 50S ribosomal protein L19; IMG reference gene:2503010400; PFAM: Ribosomal protein L19; TIGRFAM: ribosomal protein L19, bacterial type. | 0.996 |
Dalk_1890 | Dalk_4646 | PFAM: ribosomal protein S4; RNA-binding S4 domain protein; KEGG: gsu:GSU2832 30S ribosomal protein S4; IMG reference gene:2503007602; PFAM: Ribosomal protein S4/S9 N-terminal domain; S4 domain; TIGRFAM: ribosomal protein S4, bacterial/organelle type. | KEGG: dol:Dole_2306 tRNA (guanine-N1)-methyltransferase; TIGRFAM: tRNA (guanine-N1)-methyltransferase; PFAM: tRNA (guanine-N1-)-methyltransferase; IMG reference gene:2503010402; PFAM: tRNA (Guanine-1)-methyltransferase; TIGRFAM: tRNA (guanine-N1)-methyltransferase. | 0.945 |
Dalk_1890 | Dalk_4647 | PFAM: ribosomal protein S4; RNA-binding S4 domain protein; KEGG: gsu:GSU2832 30S ribosomal protein S4; IMG reference gene:2503007602; PFAM: Ribosomal protein S4/S9 N-terminal domain; S4 domain; TIGRFAM: ribosomal protein S4, bacterial/organelle type. | TIGRFAM: 16S rRNA processing protein RimM; PFAM: RimM protein; PRC-barrel domain protein; KEGG: gbm:Gbem_3429 16S rRNA processing protein RimM; IMG reference gene:2503010403; PFAM: PRC-barrel domain; RimM N-terminal domain; TIGRFAM: 16S rRNA processing protein RimM. | 0.925 |
Dalk_1890 | Dalk_4649 | PFAM: ribosomal protein S4; RNA-binding S4 domain protein; KEGG: gsu:GSU2832 30S ribosomal protein S4; IMG reference gene:2503007602; PFAM: Ribosomal protein S4/S9 N-terminal domain; S4 domain; TIGRFAM: ribosomal protein S4, bacterial/organelle type. | PFAM: ribosomal protein S16; KEGG: lme:LEUM_1485 SSU ribosomal protein S16P; IMG reference gene:2503010405; PFAM: Ribosomal protein S16; TIGRFAM: ribosomal protein S16. | 0.999 |
Dalk_1890 | Dalk_4737 | PFAM: ribosomal protein S4; RNA-binding S4 domain protein; KEGG: gsu:GSU2832 30S ribosomal protein S4; IMG reference gene:2503007602; PFAM: Ribosomal protein S4/S9 N-terminal domain; S4 domain; TIGRFAM: ribosomal protein S4, bacterial/organelle type. | NusA antitermination factor; Modifies transcription through interactions with RNA polymerase affecting elongation, readthrough, termination, and antitermination; IMG reference gene:2503010494; PFAM: NusA N-terminal domain; S1 RNA binding domain; TIGRFAM: transcription termination factor NusA; transcription termination factor NusA, C-terminal duplication. | 0.989 |
Dalk_1915 | Dalk_1889 | PFAM: ribosomal protein L3; KEGG: dol:Dole_0708 ribosomal protein L3; IMG reference gene:2503007627; PFAM: Ribosomal protein L3; TIGRFAM: 50S ribosomal protein L3, bacterial. | KEGG: dol:Dole_0733 DNA-directed RNA polymerase, alpha subunit; TIGRFAM: DNA-directed RNA polymerase, alpha subunit; PFAM: RNA polymerase alpha subunit domain protein; RNA polymerase dimerisation; RNA polymerase insert; SMART: RNA polymerase RpoA/D/Rpb3-type; IMG reference gene:2503007601; PFAM: RNA polymerase Rpb3/Rpb11 dimerisation domain; RNA polymerase Rpb3/RpoA insert domain; Bacterial RNA polymerase, alpha chain C terminal domain; TIGRFAM: DNA-directed RNA polymerase, alpha subunit, bacterial and chloroplast-type. | 0.996 |
Dalk_1915 | Dalk_1890 | PFAM: ribosomal protein L3; KEGG: dol:Dole_0708 ribosomal protein L3; IMG reference gene:2503007627; PFAM: Ribosomal protein L3; TIGRFAM: 50S ribosomal protein L3, bacterial. | PFAM: ribosomal protein S4; RNA-binding S4 domain protein; KEGG: gsu:GSU2832 30S ribosomal protein S4; IMG reference gene:2503007602; PFAM: Ribosomal protein S4/S9 N-terminal domain; S4 domain; TIGRFAM: ribosomal protein S4, bacterial/organelle type. | 0.999 |