STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bsel_2019PFAM: YolD-like protein. (105 aa)    
Predicted Functional Partners:
Bsel_1375
Hypothetical protein.
  
     0.723
Bsel_1888
Hypothetical protein.
 
    0.702
Bsel_2020
KEGG: geo:Geob_3171 DNA-directed DNA polymerase; PFAM: UMUC domain protein DNA-repair protein; Belongs to the DNA polymerase type-Y family.
 
   
 0.681
Bsel_2941
PFAM: Protein of unknown function DUF2207, membrane; KEGG: RFX1; regulatory factor X, 1 (influences HLA class II expression); K09173 regulatory factor X 1/2/3.
  
     0.617
Bsel_1429
KEGG: hypothetical protein.
  
     0.568
Bsel_1886
Hypothetical protein.
  
     0.559
Bsel_2662
Hypothetical protein; KEGG: dat:HRM2_14680 HsdR1.
  
     0.559
Bsel_2432
PFAM: protein of unknown function DUF1510; KEGG: TSPYL2; TSPY-like 2; K11285 TSPY-like 2.
  
     0.537
Bsel_0735
PFAM: protein of unknown function DUF1648.
  
     0.517
Bsel_1389
PFAM: protein of unknown function DUF350; KEGG: reh:H16_A0040 hypothetical protein.
  
     0.513
Your Current Organism:
Bacillus selenitireducens
NCBI taxonomy Id: 439292
Other names: Bacillus selenitireducens MLS10, [. selenitireducens MLS10, [Bacillus] selenitireducens MLS10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.