STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bsel_3063Glycosyl transferase, WecB/TagA/CpsF family; Catalyzes the conversion of GlcNAc-PP-undecaprenol into ManNAc-GlcNAc-PP-undecaprenol, the first committed lipid intermediate in the de novo synthesis of teichoic acid. (246 aa)    
Predicted Functional Partners:
Bsel_3064
PFAM: Glycosyl transferase, family 4, conserved region; KEGG: geo:Geob_2139 phospho-N-acetylmuramoyl-pentapeptide-transferase.
 
 
 
 0.950
Bsel_3066
KEGG: scl:sce2259 hypothetical protein; TIGRFAM: polysaccharide pyruvyl transferase CsaB; PFAM: polysaccharide pyruvyl transferase.
   
 0.920
Bsel_3047
PFAM: sugar transferase; KEGG: fph:Fphi_1244 galactosyl transferase.
    
 0.816
Bsel_3065
TIGRFAM: nucleotide sugar dehydrogenase; KEGG: gsu:GSU1854 UDP-N-acetyl-D-mannosamine dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.
 
   
 0.758
Bsel_3161
TIGRFAM: UDP-N-acetylglucosamine 2-epimerase; KEGG: vvy:VV0341 UDP-N-acetylglucosamine 2-epimerase; PFAM: UDP-N-acetylglucosamine 2-epimerase; Belongs to the UDP-N-acetylglucosamine 2-epimerase family.
 
   
 0.748
Bsel_3060
PFAM: glycosyl transferase group 1; KEGG: scl:sce5461 glycogen synthase.
 
 
 0.660
Bsel_3058
PFAM: S-layer domain protein; KEGG: hypothetical protein.
 
     0.641
Bsel_3062
KEGG: dal:Dalk_4314 hypothetical protein.
       0.636
Bsel_3057
PFAM: S-layer domain protein; KEGG: hypothetical protein.
 
    0.580
Bsel_0819
PFAM: S-layer domain protein; YLP motif domain protein; KEGG: hypothetical protein.
  
   
 0.565
Your Current Organism:
Bacillus selenitireducens
NCBI taxonomy Id: 439292
Other names: Bacillus selenitireducens MLS10, [. selenitireducens MLS10, [Bacillus] selenitireducens MLS10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.