STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Oant_0040Hydroxymethylglutaryl-CoA lyase; PFAM: pyruvate carboxyltransferase; KEGG: bmb:BruAb1_0017 3-hydroxy 3-methylglutarate-CoA lyase. (287 aa)    
Predicted Functional Partners:
Oant_0041
PFAM: Enoyl-CoA hydratase/isomerase; KEGG: bms:BR0016 enoyl-CoA hydratase/isomerase family protein; Belongs to the enoyl-CoA hydratase/isomerase family.
 0.998
Oant_0038
Propionyl-CoA carboxylase; PFAM: carboxyl transferase; KEGG: bms:BR0019 carboxyl transferase family protein.
 
 
 0.963
Oant_0039
PFAM: biotin/lipoyl attachment domain-containing protein; Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; KEGG: bmb:BruAb1_0018 biotin carboxylase.
  
 0.958
Oant_0036
TIGRFAM: acetoacetyl-CoA synthase; PFAM: AMP-dependent synthetase and ligase; KEGG: bms:BR0021 acetoacetyl-CoA synthase.
 
 
 0.955
Oant_1130
TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase; KEGG: bms:BR1772 acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
  
 
 0.924
Oant_3107
TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase; KEGG: bms:BRA0448 acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
  
 
 0.924
Oant_3718
TIGRFAM: acetyl-CoA acetyltransferase; beta-ketoadipyl CoA thiolase; PFAM: Thiolase; KEGG: bms:BRA0636 beta-ketoadipyl CoA thiolase; Belongs to the thiolase-like superfamily. Thiolase family.
  
 
 0.924
Oant_4020
TIGRFAM: acetyl-CoA acetyltransferase; beta-ketoadipyl CoA thiolase; PFAM: Thiolase; KEGG: atc:AGR_L_640 beta-ketoadipyl CoA thiolase; Belongs to the thiolase-like superfamily. Thiolase family.
  
 
 0.924
Oant_4032
TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase; KEGG: bms:BRA0794 fatty oxidation complex, beta subunit, putative; Belongs to the thiolase-like superfamily. Thiolase family.
  
 
 0.924
Oant_0037
PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: bmb:BruAb1_0020 Ivd, isovaleryl-CoA dehydrogenase.
 
 0.908
Your Current Organism:
Ochrobactrum anthropi
NCBI taxonomy Id: 439375
Other names: O. anthropi ATCC 49188, Ochrobactrum anthropi ATCC 49188, Ochrobactrum anthropi DSM 6882, Ochrobactrum anthropi LMG 3331, Ochrobactrum anthropi str. ATCC 49188, Ochrobactrum anthropi strain ATCC 49188
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