STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
Cooccurrence
Coexpression
Experiments
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[Homology]
Score
Oant_0439Proline racemase; Catalyzes the epimerization of trans-4-hydroxy-L-proline (t4LHyp) to cis-4-hydroxy-D-proline (c4DHyp) in vitro, albeit with low efficiency. The physiological substrate may be different. Displays no proline racemase activity. (343 aa)    
Predicted Functional Partners:
Oant_1110
D-amino-acid dehydrogenase; PFAM: FAD dependent oxidoreductase; KEGG: bmb:BruAb1_1774 D-amino acid dehydrogenase small subunit.
 
   
 0.711
Oant_2898
PFAM: dihydrodipicolinate synthetase; KEGG: mlo:mll6811 dihydroxydipicolinate synthase; Belongs to the DapA family.
 
    0.509
Oant_4074
PFAM: FAD dependent oxidoreductase; KEGG: aav:Aave_2554 D-amino-acid dehydrogenase.
 
   
 0.492
Oant_2899
PFAM: Malate/L-lactate dehydrogenase; KEGG: atc:AGR_L_410 probable L-malate dehydrogenase; Belongs to the LDH2/MDH2 oxidoreductase family.
 
   
 0.488
Oant_3709
PFAM: FAD dependent oxidoreductase; KEGG: bms:BRA0630 amino acid dehydrogenase, putative.
 
   
 0.428
Oant_0009
PFAM: protein of unknown function DUF126; KEGG: pde:Pden_4854 protein of unknown function DUF521.
 
  
 0.409
Oant_3468
TIGRFAM: Ectoine utilization protein EutC; PFAM: ornithine cyclodeaminase/mu-crystallin; Shikimate/quinate 5-dehydrogenase; KEGG: sme:SMb20433 putative cyclodeaminase protein.
 
   
 0.404
Your Current Organism:
Ochrobactrum anthropi
NCBI taxonomy Id: 439375
Other names: O. anthropi ATCC 49188, Ochrobactrum anthropi ATCC 49188, Ochrobactrum anthropi DSM 6882, Ochrobactrum anthropi LMG 3331, Ochrobactrum anthropi str. ATCC 49188, Ochrobactrum anthropi strain ATCC 49188
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