STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Oant_0678TIGRFAM: P-type DNA transfer protein VirB5; PFAM: type IV secretion system family protein; KEGG: atc:AGR_pAT_224 conjugal transfer protein. (232 aa)    
Predicted Functional Partners:
Oant_0680
PFAM: TrbL/VirB6 plasmid conjugal transfer protein; KEGG: atc:AGR_pAT_226 virB6 type IV secretion protein.
 
 
 
 0.985
Oant_0682
PFAM: VirB8 family protein; KEGG: atc:AGR_pAT_228 virB8 type IV secretion protein.
 
   
 0.973
Oant_0677
TIGRFAM: type IV secretion/conjugal transfer ATPase, VirB4 family; PFAM: CagE TrbE VirB component of type IV transporter system; SMART: AAA ATPase; KEGG: sme:SMa1315 VirB4 type IV secretion protein.
 
   
 0.959
Oant_0674
KEGG: sme:SMa1321 virB1 type IV secretion protein.
 
   
 0.949
Oant_0683
TIGRFAM: P-type conjugative transfer protein VirB9; PFAM: Conjugal transfer protein TrbG/VirB9/CagX; KEGG: atc:AGR_pAT_229 virB9 type IV secretion protein.
 
   
 0.947
Oant_0675
PFAM: VIRB2 type IV secretion fmaily protein; KEGG: sme:SMa1319 VirB2 type IV secretion protein.
 
   
 0.935
Oant_0684
PFAM: conjugation TrbI family protein; KEGG: sme:SMa1303 VirB10 transmembrane type IV secretion protein.
 
   
 0.929
Oant_0679
KEGG: mes:Meso_4344 hypothetical protein.
     
 0.878
Oant_0685
P-type DNA transfer ATPase VirB11; Part of the Type IV secretion system. Belongs to the GSP E family.
 
   
 0.857
Oant_0676
PFAM: type IV secretory pathway VirB3 family protein; KEGG: atc:AGR_pAT_222 virB3 type IV secretion protein.
     
 0.818
Your Current Organism:
Ochrobactrum anthropi
NCBI taxonomy Id: 439375
Other names: O. anthropi ATCC 49188, Ochrobactrum anthropi ATCC 49188, Ochrobactrum anthropi DSM 6882, Ochrobactrum anthropi LMG 3331, Ochrobactrum anthropi str. ATCC 49188, Ochrobactrum anthropi strain ATCC 49188
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.