STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Oant_1418PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: atc:AGR_L_3185 putative LACI-type transcriptional regulator. (319 aa)    
Predicted Functional Partners:
Oant_1416
Monosaccharide-transporting ATPase; PFAM: inner-membrane translocator; KEGG: atc:AGR_L_3181 putative transport system permease protein.
  0.985
Oant_1415
Monosaccharide-transporting ATPase; PFAM: inner-membrane translocator; KEGG: atc:AGR_L_3179 hypothetical ABC transporter permease protein YjfF.
  0.984
Oant_1417
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: atc:AGR_L_3184 putative ATP-binding component of ABC transporter.
 
  0.981
Oant_0409
Integral membrane sensor hybrid histidine kinase; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: bms:BR0316 sensor histidine kinase/response regulator.
   
 
 0.818
Oant_2124
Multi-sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; SMART: PAS domain containing protein; KEGG: bmb:BruAb1_1044 sensory box histidine kinase/response regulator.
   
 
 0.817
Oant_1426
Monosaccharide-transporting ATPase; PFAM: inner-membrane translocator; KEGG: bmb:BruAb2_0298 sugar ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family.
    0.716
Oant_1424
KEGG: bms:BRA0937 sugar ABC transporter, periplasmic sugar-binding protein.
 
  
 0.710
Oant_1425
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bmb:BruAb2_0297 sugar ABC transporter, ATP-binding protein.
 
   0.670
Oant_1414
PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: bmb:BruAb2_0289 transcriptional regulator, GntR family.
 
     0.579
Oant_4372
PFAM: inner-membrane translocator; KEGG: rru:Rru_A1335 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
  
   0.572
Your Current Organism:
Ochrobactrum anthropi
NCBI taxonomy Id: 439375
Other names: O. anthropi ATCC 49188, Ochrobactrum anthropi ATCC 49188, Ochrobactrum anthropi DSM 6882, Ochrobactrum anthropi LMG 3331, Ochrobactrum anthropi str. ATCC 49188, Ochrobactrum anthropi strain ATCC 49188
Server load: low (38%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.