STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Oant_1883PFAM: major facilitator superfamily MFS_1; KEGG: eca:ECA4457 putative methyl viologen resistance protein. (495 aa)    
Predicted Functional Partners:
Oant_3991
TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: nha:Nham_3278 drug resistance transporter EmrB/QacA subfamily.
  
     0.750
Oant_1884
PFAM: regulatory protein TetR; KEGG: pau:PA14_47610 putative transcriptional regulator.
 
     0.673
Oant_1885
TIGRFAM: precorrin-4 C11-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: bme:BMEI0701 precorrin-4 C11-methyltransferase.
       0.509
Oant_3990
PFAM: secretion protein HlyD family protein; KEGG: rpb:RPB_0207 secretion protein HlyD.
 
 
 0.505
Oant_4226
PFAM: secretion protein HlyD family protein; KEGG: bme:BMEII1118 multidrug resistance protein A.
 
 
 0.505
Oant_3393
PFAM: secretion protein HlyD family protein; KEGG: bmb:BruAb2_0750 HlyD family secretion protein.
 
 
 0.460
Oant_1408
PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: sme:SMc04362 putative transport protein.
  
   
 0.418
Oant_1775
TIGRFAM: drug resistance transporter, Bcr/CflA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: bms:BR1401 drug resistance transporter, Bcr/CflA family.
  
   
 0.405
Your Current Organism:
Ochrobactrum anthropi
NCBI taxonomy Id: 439375
Other names: O. anthropi ATCC 49188, Ochrobactrum anthropi ATCC 49188, Ochrobactrum anthropi DSM 6882, Ochrobactrum anthropi LMG 3331, Ochrobactrum anthropi str. ATCC 49188, Ochrobactrum anthropi strain ATCC 49188
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