Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Oant_2393 | Oant_2395 | Oant_2393 | Oant_2395 | PFAM: inositol monophosphatase; KEGG: bmb:BruAb1_0845 inositol monophosphatase family protein. | Hypothetical protein. | 0.532 |
Oant_2393 | nusA | Oant_2393 | Oant_0749 | PFAM: inositol monophosphatase; KEGG: bmb:BruAb1_0845 inositol monophosphatase family protein. | NusA antitermination factor; Participates in both transcription termination and antitermination. | 0.412 |
Oant_2393 | nusG | Oant_2393 | Oant_1942 | PFAM: inositol monophosphatase; KEGG: bmb:BruAb1_0845 inositol monophosphatase family protein. | NusG antitermination factor; Participates in transcription elongation, termination and antitermination. | 0.425 |
Oant_2393 | ttcA | Oant_2393 | Oant_2394 | PFAM: inositol monophosphatase; KEGG: bmb:BruAb1_0845 inositol monophosphatase family protein. | PP-loop domain protein; Catalyzes the ATP-dependent 2-thiolation of cytidine in position 32 of tRNA, to form 2-thiocytidine (s(2)C32). The sulfur atoms are provided by the cysteine/cysteine desulfurase (IscS) system. | 0.793 |
Oant_2395 | Oant_2393 | Oant_2395 | Oant_2393 | Hypothetical protein. | PFAM: inositol monophosphatase; KEGG: bmb:BruAb1_0845 inositol monophosphatase family protein. | 0.532 |
Oant_2395 | ttcA | Oant_2395 | Oant_2394 | Hypothetical protein. | PP-loop domain protein; Catalyzes the ATP-dependent 2-thiolation of cytidine in position 32 of tRNA, to form 2-thiocytidine (s(2)C32). The sulfur atoms are provided by the cysteine/cysteine desulfurase (IscS) system. | 0.532 |
nusA | Oant_2393 | Oant_0749 | Oant_2393 | NusA antitermination factor; Participates in both transcription termination and antitermination. | PFAM: inositol monophosphatase; KEGG: bmb:BruAb1_0845 inositol monophosphatase family protein. | 0.412 |
nusA | nusG | Oant_0749 | Oant_1942 | NusA antitermination factor; Participates in both transcription termination and antitermination. | NusG antitermination factor; Participates in transcription elongation, termination and antitermination. | 0.983 |
nusG | Oant_2393 | Oant_1942 | Oant_2393 | NusG antitermination factor; Participates in transcription elongation, termination and antitermination. | PFAM: inositol monophosphatase; KEGG: bmb:BruAb1_0845 inositol monophosphatase family protein. | 0.425 |
nusG | nusA | Oant_1942 | Oant_0749 | NusG antitermination factor; Participates in transcription elongation, termination and antitermination. | NusA antitermination factor; Participates in both transcription termination and antitermination. | 0.983 |
ttcA | Oant_2393 | Oant_2394 | Oant_2393 | PP-loop domain protein; Catalyzes the ATP-dependent 2-thiolation of cytidine in position 32 of tRNA, to form 2-thiocytidine (s(2)C32). The sulfur atoms are provided by the cysteine/cysteine desulfurase (IscS) system. | PFAM: inositol monophosphatase; KEGG: bmb:BruAb1_0845 inositol monophosphatase family protein. | 0.793 |
ttcA | Oant_2395 | Oant_2394 | Oant_2395 | PP-loop domain protein; Catalyzes the ATP-dependent 2-thiolation of cytidine in position 32 of tRNA, to form 2-thiocytidine (s(2)C32). The sulfur atoms are provided by the cysteine/cysteine desulfurase (IscS) system. | Hypothetical protein. | 0.532 |