STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
bioBBiotin synthase; Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical-based mechanism; Belongs to the radical SAM superfamily. Biotin synthase family. (336 aa)    
Predicted Functional Partners:
bioD
Dethiobiotin synthase; Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8- diaminopelargonic acid (DAPA) to form an ureido ring.
 
 
 0.999
Oant_2820
TIGRFAM: adenosylmethionine-8-amino-7-oxononanoate aminotransferase; PFAM: aminotransferase class-III; KEGG: bms:BRA0489 adenosylmethionine-8-amino-7-oxononanoate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
 0.987
Oant_2822
8-amino-7-oxononanoate synthase; PFAM: aminotransferase class I and II; aminotransferase class-III; KEGG: bme:BMEII0776 8-amino-7-oxononanoate synthase.
  
 0.986
Oant_2409
TIGRFAM: biotin--acetyl-CoA-carboxylase ligase; PFAM: biotin protein ligase domain protein; biotin/lipoate A/B protein ligase; KEGG: bms:BR0816 biotin--acetyl-CoA-carboxylase ligase.
  
 
 0.937
Oant_0412
TIGRFAM: 5-aminolevulinic acid synthase; PFAM: aminotransferase class I and II; aminotransferase class-III; KEGG: bmb:BruAb1_0345 HemA, 5-aminolevulinic acid synthase.
  
 0.835
Oant_2819
PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III domain protein; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; KEGG: bmb:BruAb2_0734 hypothetical 3-oxoacyl-(acyl-carrier-protein) synthase III.
  
  
 0.805
Oant_2853
PFAM: aminotransferase class-III; KEGG: mlo:mll0107 aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
 
  
 0.684
Oant_0199
PFAM: aminotransferase class-III; KEGG: bmb:BruAb1_0186 hypothetical protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
 
  
 0.678
Oant_1442
PFAM: aminotransferase class-III; KEGG: bms:BRA0926 omega-amino acid--pyruvate aminotransferase, putative; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
 
  
 0.674
Oant_3472
PFAM: aminotransferase class-III; KEGG: ret:RHE_PF00202 probable adenosylmethionine--8-amino-7-oxononanoate aminotransferaseprotein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
 
  
 0.666
Your Current Organism:
Ochrobactrum anthropi
NCBI taxonomy Id: 439375
Other names: O. anthropi ATCC 49188, Ochrobactrum anthropi ATCC 49188, Ochrobactrum anthropi DSM 6882, Ochrobactrum anthropi LMG 3331, Ochrobactrum anthropi str. ATCC 49188, Ochrobactrum anthropi strain ATCC 49188
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