• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
Oant_2854 protein (Ochrobactrum anthropi) - STRING interaction network
"Oant_2854" - PFAM: protein of unknown function DUF849 in Ochrobactrum anthropi
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Oant_2854PFAM- protein of unknown function DUF849; KEGG- mlo-mll0106 hypothetical protein (315 aa)    
Predicted Functional Partners:
Oant_2853
PFAM- aminotransferase class-III; KEGG- mlo-mll0107 aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family (455 aa)
 
          0.861
Oant_2852
KEGG- mlo-mll0108 hypothetical protein (546 aa)
   
        0.814
Oant_2850
TIGRFAM- polar amino acid ABC transporter, inner membrane subunit; PFAM- binding-protein-dependent transport systems inner membrane component; KEGG- pfl-PFL_2358 amino acid ABC transporter (219 aa)
              0.797
Oant_2851
PFAM- ABC transporter related; SMART- AAA ATPase; KEGG- pfl-PFL_2357 glutamine ABC transporter, ATP-binding protein (257 aa)
              0.789
Oant_2849
TIGRFAM- polar amino acid ABC transporter, inner membrane subunit; PFAM- binding-protein-dependent transport systems inner membrane component; KEGG- pfl-PFL_2359 amino acid ABC transporter, permease protein (215 aa)
              0.780
Oant_2856
PFAM- histone deacetylase superfamily; KEGG- mlo-mll0103 acetylpolyamine aminohydrolase (342 aa)
 
          0.690
lcdH
L-carnitine dehydrogenase; Catalyzes the NAD(+)-dependent oxidation of L-carnitine to 3-dehydrocarnitine (491 aa)
 
   
  0.649
Oant_2857
KEGG- pde-Pden_0476 thioesterase superfamily protein (139 aa)
   
        0.605
Oant_2848
PFAM- extracellular solute-binding protein family 3; KEGG- pfl-PFL_2360 amino acid ABC transporter, periplasmic amino acid-binding protein (261 aa)
              0.588
Oant_2855
PFAM- GCN5-related N-acetyltransferase; KEGG- mlo-mll0104 acetyltransferase (173 aa)
              0.574
Your Current Organism:
Ochrobactrum anthropi
NCBI taxonomy Id: 439375
Other names: O. anthropi ATCC 49188, Ochrobactrum anthropi, Ochrobactrum anthropi ATCC 49188, Ochrobactrum anthropi ATCC49188, Ochrobactrum anthropi DSM 6882, Ochrobactrum anthropi LMG 3331, Ochrobactrum anthropi str. ATCC 49188, Ochrobactrum anthropi strain ATCC 49188
Server load: low (18%) [HD]