STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Oant_3064PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: sme:SMb20349 probable ABC transporter sugar-binding protein. (318 aa)    
Predicted Functional Partners:
Oant_3061
Monosaccharide-transporting ATPase; PFAM: inner-membrane translocator; KEGG: sme:SMb20352 probable sugar ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family.
  0.984
Oant_3062
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ret:RHE_PF00035 probable ribose ABC transporter, ATP-binding protein.
 
  0.971
Oant_2914
Monosaccharide-transporting ATPase; PFAM: inner-membrane translocator; KEGG: bmb:BruAb2_0372 ribose ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
  0.965
Oant_2913
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bms:BRA0860 ribose ABC transporter, ATP-binding protein.
  
  0.949
Oant_2915
PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: bmb:BruAb2_0373 RbsB-2, ribose ABC transporter, periplasmic D-ribose-binding protein.
  
  
 
0.907
Oant_3063
KEGG: sme:SMb20350 hypothetical protein.
 
    0.899
Oant_0409
Integral membrane sensor hybrid histidine kinase; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: bms:BR0316 sensor histidine kinase/response regulator.
   
 
 0.818
Oant_2124
Multi-sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; SMART: PAS domain containing protein; KEGG: bmb:BruAb1_1044 sensory box histidine kinase/response regulator.
   
 
 0.817
Oant_3060
PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: rle:pRL120389 putative GFO/IDH/MocA family oxidoreductase.
 
    0.778
Oant_2912
KEGG: bmb:BruAb2_0370 hypothetical protein.
 
    0.755
Your Current Organism:
Ochrobactrum anthropi
NCBI taxonomy Id: 439375
Other names: O. anthropi ATCC 49188, Ochrobactrum anthropi ATCC 49188, Ochrobactrum anthropi DSM 6882, Ochrobactrum anthropi LMG 3331, Ochrobactrum anthropi str. ATCC 49188, Ochrobactrum anthropi strain ATCC 49188
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