STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Aboo_1158SMART: cation transporting ATPase domain protein; TIGRFAM: plasma-membrane proton-efflux P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; KEGG: mja:MJ1226 plasma membrane ATPase 1 (aha1); PFAM: E1-E2 ATPase-associated domain protein; cation transporting ATPase domain protein; Haloacid dehalogenase domain protein hydrolase. (814 aa)    
Predicted Functional Partners:
Aboo_1267
PFAM: V-type ATPase 116 kDa subunit; KEGG: mhu:Mhun_1775 V-type ATPase, 116 kDa subunit; Belongs to the V-ATPase 116 kDa subunit family.
   
 0.940
atpD
V-type ATPase, D subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane.
   
 0.936
atpA
ATP synthase, A subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The archaeal alpha chain is a catalytic subunit. Belongs to the ATPase alpha/beta chains family.
   
 0.925
Aboo_1261
H(+)-transporting two-sector ATPase; KEGG: pfu:PF0183 V-type ATP synthase subunit B; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; H+transporting two-sector ATPase alpha/beta subunit domain protein.
  
 0.924
Aboo_1265
PFAM: H+transporting two-sector ATPase E subunit; KEGG: mka:MK1014 V-type ATP synthase subunit E.
  
 
 0.920
ppa
Inorganic diphosphatase; Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions.
  
 
 0.919
atpF
Vacuolar H+transporting two-sector ATPase F subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane.
   
 0.914
Aboo_1264
PFAM: H+transporting two-sector ATPase C (AC39) subunit; KEGG: mmq:MmarC5_0551 V-type ATP synthase subunit C.
    
 0.913
Aboo_1268
KEGG: mfe:Mefer_0458 ATP synthase H subunit.
    
  0.900
Aboo_0314
PFAM: peptidase M50; KEGG: tac:Ta1274 sterol-regulatory element-binding proteins intramembrane protease related protein.
     
 0.616
Your Current Organism:
Aciduliprofundum boonei
NCBI taxonomy Id: 439481
Other names: A. boonei T469, Aciduliprofundum boonei DSM 19572, Aciduliprofundum boonei T469, Aciduliprofundum boonei str. T469, Aciduliprofundum boonei strain T469
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