STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUH78769.1Hypothetical protein. (325 aa)    
Predicted Functional Partners:
CUH78765.1
5-bromo-4-chloroindolyl phosphate hydrolysis protein.
 
     0.932
CUH78767.1
TelA-like protein; Belongs to the TelA family.
 
     0.890
CUH78763.1
Hypothetical protein.
 
     0.749
CUH74744.1
Hypothetical protein.
  
     0.708
CUH78771.1
Putative virion core protein (lumpy skin disease virus).
       0.704
CUH78772.1
DNA-directed RNA polymerase subunit P.
 
     0.681
CUH76909.1
Hypothetical protein.
  
     0.667
CUH76530.1
Hypothetical protein.
  
     0.656
CUH75089.1
Hypothetical protein.
  
     0.638
CUH76507.1
Hypothetical protein.
  
     0.624
Your Current Organism:
Tropicibacter naphthalenivorans
NCBI taxonomy Id: 441103
Other names: DSM 19561, JCM 14838, T. naphthalenivorans, Tropicibacter naphthalenivorans Harwati et al. 2009, alpha proteobacterium C02, strain C02
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.