STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFC09516.1Glycosyltransferase involved in cell wall bisynthesis. (338 aa)    
Predicted Functional Partners:
SFC09443.1
Polysaccharide transporter, PST family.
 
  
 0.947
SFC09495.1
Glycosyl transferase family 2.
 
 
  0.944
SFC09469.1
Glycosyltransferase involved in cell wall bisynthesis.
 
 
  0.928
SFC09418.1
Polysaccharide biosynthesis/export protein.
 
    0.874
SFC09661.1
Polymer biosynthesis protein, WecB/TagA/CpsF family.
 
 
 0.847
glgB
1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
   
  0.810
SFC09566.1
Hypothetical protein.
 
 
  0.807
SFC09611.1
Uncharacterized protein involved in exopolysaccharide biosynthesis.
  
 
  0.778
SFB79653.1
Mannose-1-phosphate guanylyltransferase (GDP); Belongs to the mannose-6-phosphate isomerase type 2 family.
  
 
 0.760
SFC97379.1
Alpha-N-acetylglucosamine transferase.
   
 0.749
Your Current Organism:
Tropicimonas isoalkanivorans
NCBI taxonomy Id: 441112
Other names: DSM 19548, JCM 14837, T. isoalkanivorans, Tropicimonas isoalkanivorans Harwati et al. 2009, alpha proteobacterium B51, strain B51
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.