STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mpop_0014PFAM: SMP-30/Gluconolaconase/LRE domain protein; KEGG: mex:Mext_0015 SMP-30/gluconolaconase/LRE domain protein. (294 aa)    
Predicted Functional Partners:
Mpop_0588
Gluconolactonase; PFAM: SMP-30/Gluconolaconase/LRE domain protein; KEGG: mex:Mext_0612 gluconolactonase.
  
     0.706
Mpop_4210
PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: bja:blr5276 hypothetical protein.
 
   
 0.648
Mpop_1059
Gluconolactonase; PFAM: SMP-30/Gluconolaconase/LRE domain protein; KEGG: oan:Oant_3913 gluconolactonase.
  
     0.623
Mpop_2993
Aldose 1-epimerase; Converts alpha-aldose to the beta-anomer.
 
   
 0.592
Mpop_4202
Gluconate 2-dehydrogenase (acceptor); KEGG: azc:AZC_2719 GMC oxidoreductase.
  
 
 0.515
Mpop_0013
PFAM: glucose-inhibited division protein A; FAD dependent oxidoreductase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: mex:Mext_0014 FAD-dependent pyridine nucleotide-disulphide oxidoreductase.
       0.512
Mpop_5051
PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: mex:Mext_4538 oxidoreductase domain protein.
 
  
 0.511
Mpop_4201
Gluconate 2-dehydrogenase (acceptor); PFAM: cytochrome c class I; KEGG: azc:AZC_2720 putative cytochrome-c oxidase protein.
     
  0.499
Mpop_5370
Gluconate 2-dehydrogenase (acceptor); PFAM: cytochrome c class I; KEGG: mex:Mext_4825 gluconate 2-dehydrogenase (acceptor).
     
  0.499
Mpop_3447
PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: mex:Mext_3251 oxidoreductase domain protein.
 
  
 0.462
Your Current Organism:
Methylorubrum populi
NCBI taxonomy Id: 441620
Other names: M. populi BJ001, Methylobacterium populi BJ001, Methylobacterium sp. BJ001, Methylorubrum populi BJ001
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