STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mpop_5012KEGG: mex:Mext_4496 twin-arginine translocation pathway signal. (430 aa)    
Predicted Functional Partners:
Mpop_5011
TIGRFAM: nitrate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mex:Mext_4495 nitrate ABC transporter, inner membrane subunit.
 
 
 0.997
Mpop_5010
KEGG: mex:Mext_4494 nitrate ABC transporter, ATPase subunits C and D; TIGRFAM: nitrate ABC transporter, ATPase subunits C and D; PFAM: ABC transporter related; SMART: AAA ATPase.
 
 0.996
Mpop_4661
KEGG: mex:Mext_1146 nitrate ABC transporter, ATPase subunits C and D; TIGRFAM: nitrate ABC transporter, ATPase subunits C and D; PFAM: ABC transporter related; SMART: AAA ATPase.
 
 0.986
Mpop_4662
TIGRFAM: nitrate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mex:Mext_1147 nitrate ABC transporter, inner membrane subunit.
 
 
 0.986
Mpop_3417
PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; BFD domain protein [2Fe-2S]-binding domain protein; KEGG: mex:Mext_3222 nitrate reductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily.
 
 
 0.984
Mpop_3774
KEGG: mpt:Mpe_A3487 putative nitrate transporter component, NrtA.
  
  
 
0.922
Mpop_4663
KEGG: mex:Mext_1148 ABC transporter nitrate-binding protein.
  
  
 
0.918
Mpop_5009
PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glucose-inhibited division protein A; KEGG: mex:Mext_4493 FAD-dependent pyridine nucleotide-disulphide oxidoreductase.
 
  
 0.873
Mpop_5014
PFAM: response regulator receiver; ANTAR domain protein; KEGG: mex:Mext_4498 ANTAR domain protein.
 
  
 0.822
Mpop_5008
TIGRFAM: precorrin-3B synthase; PFAM: nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein; nitrite and sulphite reductase 4Fe-4S region; KEGG: mex:Mext_4492 precorrin-3B synthase.
 
   
 0.741
Your Current Organism:
Methylorubrum populi
NCBI taxonomy Id: 441620
Other names: M. populi BJ001, Methylobacterium populi BJ001, Methylobacterium sp. BJ001, Methylorubrum populi BJ001
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