STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lacBProbable beta-galactosidase B; Cleaves beta-linked terminal galactosyl residues from gangliosides, glycoproteins, and glycosaminoglycans. (1009 aa)    
Predicted Functional Partners:
PMAA_036650
C6 transcription factor, putative.
      
 0.593
PMAA_062580
Beta-xylosidase XylA.
      
 0.589
PMAA_062560
Extracellular exo-polygalacturonase, putative.
      
 0.578
PMAA_049840
Endo-1,4-beta-xylanase; Belongs to the glycosyl hydrolase 11 (cellulase G) family.
    
 
 0.572
PMAA_011750
Endo-1,4-beta-xylanase; Belongs to the glycosyl hydrolase 11 (cellulase G) family.
    
 
 0.572
PMAA_049350
C2H2 transcription factor (Crea), putative.
      
 0.561
PMAA_102070
Endoglucanase, putative; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
  
  
 0.537
PMAA_044290
Alpha-L-arabinofuranosidase.
   
  
 0.517
PMAA_081190
Alpha-galactosidase.
   
  
 0.512
PMAA_096570
Alpha-galactosidase.
   
  
 0.512
Your Current Organism:
Talaromyces marneffei
NCBI taxonomy Id: 441960
Other names: Penicillium marneffei ATCC 18224, T. marneffei ATCC 18224, Talaromyces marneffei ATCC 18224
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