STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFH47364.1Hypothetical protein. (211 aa)    
Predicted Functional Partners:
SFH47384.1
Tat (twin-arginine translocation) pathway signal sequence.
 
     0.939
SFH47402.1
Uncharacterized conserved protein, tellurite resistance protein B (TerB) family.
       0.757
SFH47420.1
CubicO group peptidase, beta-lactamase class C family.
 
     0.745
SFI01782.1
Copper-resistance protein, CopA family.
   
    0.634
SFI03616.1
Copper-resistance protein, CopA family.
   
    0.634
SFI24940.1
Multicopper oxidase.
   
    0.634
SFI06399.1
TRAP-type C4-dicarboxylate transport system, small permease component.
  
     0.501
SFH55514.1
Hypothetical protein.
  
     0.410
SFH28114.1
NAD binding domain of 6-phosphogluconate dehydrogenase.
  
     0.402
Your Current Organism:
Halomonas xianhensis
NCBI taxonomy Id: 442341
Other names: CGMCC 1.6848, H. xianhensis, Halomonas sp. A-1, Halomonas xianhensis Zhao et al. 2012, JCM 14849, strain A-1
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.