node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GM21_0059 | GM21_2947 | GM21_0059 | GM21_2947 | PFAM: UvrD/REP helicase; KEGG: gbm:Gbem_0076 UvrD/REP helicase. | PFAM: UvrD/REP helicase; KEGG: gbm:Gbem_1337 UvrD/REP helicase. | 0.909 |
GM21_0059 | recA | GM21_0059 | GM21_3735 | PFAM: UvrD/REP helicase; KEGG: gbm:Gbem_0076 UvrD/REP helicase. | recA protein; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.899 |
GM21_0059 | recR | GM21_0059 | GM21_0193 | PFAM: UvrD/REP helicase; KEGG: gbm:Gbem_0076 UvrD/REP helicase. | Recombination protein RecR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO. | 0.662 |
GM21_0192 | GM21_0194 | GM21_0192 | GM21_0194 | TIGRFAM: pyruvate ferredoxin/flavodoxin oxidoreductase; PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; pyruvate ferredoxin/flavodoxin oxidoreductase; 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: gbm:Gbem_0209 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein. | Conserved hypothetical protein; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection. | 0.514 |
GM21_0192 | GM21_4125 | GM21_0192 | GM21_4125 | TIGRFAM: pyruvate ferredoxin/flavodoxin oxidoreductase; PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; pyruvate ferredoxin/flavodoxin oxidoreductase; 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: gbm:Gbem_0209 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein. | TIGRFAM: pyruvate ferredoxin/flavodoxin oxidoreductase; PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; pyruvate ferredoxin/flavodoxin oxidoreductase; 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: gbm:Gbem_4034 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein. | 0.999 |
GM21_0192 | dnaX | GM21_0192 | GM21_0195 | TIGRFAM: pyruvate ferredoxin/flavodoxin oxidoreductase; PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; pyruvate ferredoxin/flavodoxin oxidoreductase; 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: gbm:Gbem_0209 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein. | DNA polymerase III, subunits gamma and tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. | 0.472 |
GM21_0192 | recA | GM21_0192 | GM21_3735 | TIGRFAM: pyruvate ferredoxin/flavodoxin oxidoreductase; PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; pyruvate ferredoxin/flavodoxin oxidoreductase; 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: gbm:Gbem_0209 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein. | recA protein; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.539 |
GM21_0192 | recR | GM21_0192 | GM21_0193 | TIGRFAM: pyruvate ferredoxin/flavodoxin oxidoreductase; PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; pyruvate ferredoxin/flavodoxin oxidoreductase; 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: gbm:Gbem_0209 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein. | Recombination protein RecR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO. | 0.781 |
GM21_0194 | GM21_0192 | GM21_0194 | GM21_0192 | Conserved hypothetical protein; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection. | TIGRFAM: pyruvate ferredoxin/flavodoxin oxidoreductase; PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; pyruvate ferredoxin/flavodoxin oxidoreductase; 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: gbm:Gbem_0209 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein. | 0.514 |
GM21_0194 | GM21_1058 | GM21_0194 | GM21_1058 | Conserved hypothetical protein; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection. | TIGRFAM: DNA polymerase III, delta prime subunit; KEGG: gbm:Gbem_3205 DNA polymerase III, delta prime subunit. | 0.606 |
GM21_0194 | dnaX | GM21_0194 | GM21_0195 | Conserved hypothetical protein; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection. | DNA polymerase III, subunits gamma and tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. | 0.862 |
GM21_0194 | recR | GM21_0194 | GM21_0193 | Conserved hypothetical protein; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection. | Recombination protein RecR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO. | 0.965 |
GM21_1058 | GM21_0194 | GM21_1058 | GM21_0194 | TIGRFAM: DNA polymerase III, delta prime subunit; KEGG: gbm:Gbem_3205 DNA polymerase III, delta prime subunit. | Conserved hypothetical protein; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection. | 0.606 |
GM21_1058 | dnaX | GM21_1058 | GM21_0195 | TIGRFAM: DNA polymerase III, delta prime subunit; KEGG: gbm:Gbem_3205 DNA polymerase III, delta prime subunit. | DNA polymerase III, subunits gamma and tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. | 0.924 |
GM21_1058 | recA | GM21_1058 | GM21_3735 | TIGRFAM: DNA polymerase III, delta prime subunit; KEGG: gbm:Gbem_3205 DNA polymerase III, delta prime subunit. | recA protein; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.405 |
GM21_1058 | recO | GM21_1058 | GM21_1410 | TIGRFAM: DNA polymerase III, delta prime subunit; KEGG: gbm:Gbem_3205 DNA polymerase III, delta prime subunit. | DNA repair protein RecO; Involved in DNA repair and RecF pathway recombination. | 0.550 |
GM21_1058 | recR | GM21_1058 | GM21_0193 | TIGRFAM: DNA polymerase III, delta prime subunit; KEGG: gbm:Gbem_3205 DNA polymerase III, delta prime subunit. | Recombination protein RecR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO. | 0.680 |
GM21_2947 | GM21_0059 | GM21_2947 | GM21_0059 | PFAM: UvrD/REP helicase; KEGG: gbm:Gbem_1337 UvrD/REP helicase. | PFAM: UvrD/REP helicase; KEGG: gbm:Gbem_0076 UvrD/REP helicase. | 0.909 |
GM21_2947 | dnaX | GM21_2947 | GM21_0195 | PFAM: UvrD/REP helicase; KEGG: gbm:Gbem_1337 UvrD/REP helicase. | DNA polymerase III, subunits gamma and tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. | 0.413 |
GM21_2947 | recA | GM21_2947 | GM21_3735 | PFAM: UvrD/REP helicase; KEGG: gbm:Gbem_1337 UvrD/REP helicase. | recA protein; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.862 |