STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GM21_0904KEGG: gbm:Gbem_3341 aldehyde ferredoxin oxidoreductase; PFAM: aldehyde ferredoxin oxidoreductase; Aldehyde ferredoxin oxidoreductase; SMART: Aldehyde ferredoxin oxidoreductase. (579 aa)    
Predicted Functional Partners:
GM21_3717
Hydroxypyruvate reductase; PFAM: MOFRL domain protein; KEGG: gbm:Gbem_3609 MOFRL domain protein.
  
  
  0.911
GM21_2528
KEGG: gbm:Gbem_1693 ABC-type tungstate transport system permease component-like protein.
 
   
 0.781
GM21_0305
KEGG: gbm:Gbem_0313 Fe-S-cluster-containing hydrogenase components 2-like protein.
 
 
 0.768
GM21_0906
PFAM: class II aldolase/adducin family protein; KEGG: gbm:Gbem_3340 class II aldolase/adducin family protein.
 
     0.763
GM21_2527
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: gbm:Gbem_1694 binding-protein-dependent transport systems inner membrane component.
 
   
 0.743
GM21_2809
KEGG: gbm:Gbem_1445 4Fe-4S ferredoxin, iron-sulfur binding protein.
 
 
 0.726
GM21_1610
KEGG: gbm:Gbem_2619 4Fe-4S ferredoxin, iron-sulfur binding protein.
 
 
 0.708
GM21_0678
PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: gbm:Gbem_0665 4Fe-4S ferredoxin iron-sulfur binding domain protein.
 
 
 0.587
GM21_1124
PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: gbm:Gbem_3138 4Fe-4S ferredoxin iron-sulfur binding domain protein.
 
 
 0.571
GM21_2934
PFAM: thiamineS protein; KEGG: gbm:Gbem_1351 thiamineS protein.
 
     0.563
Your Current Organism:
Geobacter sp. M21
NCBI taxonomy Id: 443144
Other names: G. sp. M21
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.