STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GM21_2810KEGG: gbm:Gbem_1444 aldehyde ferredoxin oxidoreductase; PFAM: aldehyde ferredoxin oxidoreductase; Aldehyde ferredoxin oxidoreductase; SMART: Aldehyde ferredoxin oxidoreductase. (673 aa)    
Predicted Functional Partners:
GM21_2809
KEGG: gbm:Gbem_1445 4Fe-4S ferredoxin, iron-sulfur binding protein.
 
 0.999
GM21_1610
KEGG: gbm:Gbem_2619 4Fe-4S ferredoxin, iron-sulfur binding protein.
 
 
 0.966
GM21_2822
TIGRFAM: cyclohexa-1,5-dienecarbonyl-CoA hydratase; PFAM: Enoyl-CoA hydratase/isomerase; KEGG: gbm:Gbem_1432 cyclohexa-1,5-dienecarbonyl-CoA hydratase.
  
  
 0.924
GM21_2811
TIGRFAM: 6-oxocyclohex-1-ene-1-carbonyl-CoA hydrolase; PFAM: Enoyl-CoA hydratase/isomerase; KEGG: gbm:Gbem_1443 6-oxocyclohex-1-ene-1-carbonyl-CoA hydrolase.
 
     0.846
GM21_2808
PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: gbm:Gbem_1446 protein of unknown function DUF224 cysteine-rich region domain protein.
 
 
   0.819
GM21_2807
PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: gbm:Gbem_1447 4Fe-4S ferredoxin iron-sulfur binding domain protein.
 
   
 0.792
GM21_2813
PFAM: GCN5-related N-acetyltransferase; KEGG: gbm:Gbem_1441 GCN5-related N-acetyltransferase.
 
     0.762
GM21_2867
Benzoyl-CoA reductase; PFAM: 2-hydroxyglutaryl-CoA dehydratase D-component; KEGG: gbm:Gbem_1413 2-hydroxyglutaryl-CoA dehydratase D-component.
  
     0.754
GM21_2823
TIGRFAM: 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase; PFAM: Alcohol dehydrogenase GroES domain protein; Alcohol dehydrogenase zinc-binding domain protein; KEGG: gbm:Gbem_1431 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase.
  
   
 0.747
GM21_2800
PFAM: carboxyl transferase; KEGG: gbm:Gbem_1453 carboxyl transferase.
  
     0.728
Your Current Organism:
Geobacter sp. M21
NCBI taxonomy Id: 443144
Other names: G. sp. M21
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