STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDP24384.1DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family. (1444 aa)    
Predicted Functional Partners:
SDP43116.1
WXG100 family type VII secretion target; Belongs to the WXG100 family.
   
 
 0.998
SDP59863.1
Subtilase family protein.
 
 
 0.868
SDO80055.1
Subtilase family protein; Belongs to the peptidase S8 family.
  
 
 0.847
SDP34690.1
Subtilase family protein.
  
 
 0.847
SDP58589.1
Subtilase family protein.
  
 
 0.847
SDP24421.1
Hypothetical protein.
       0.773
SDO87455.1
Hypothetical protein.
  
 
   0.728
SDO87483.1
Hypothetical protein.
  
 
   0.707
SDO80907.1
Cell division protein FtsQ; Essential cell division protein.
   
 
 0.659
SDP22952.1
Hypothetical protein.
   
   0.635
Your Current Organism:
Phycicoccus dokdonensis
NCBI taxonomy Id: 443156
Other names: CCUG 54521, DSM 22329, KCTC 19248, P. dokdonensis, Phycicoccus dokdonensis Yoon et al. 2008, strain DS-8
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.