STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC104586612Cytochrome P450 90D2; Belongs to the cytochrome P450 family. (502 aa)    
Predicted Functional Partners:
LOC104601194
Steroid 5-alpha-reductase DET2; Involved in a reduction step in the biosynthesis of the plant steroid, brassinolide.
     
 0.954
LOC104609273
Cytochrome P450 71A1-like; Belongs to the cytochrome P450 family.
  
  
 
0.919
LOC104591542
Cytochrome P450 724B1; Belongs to the cytochrome P450 family.
  
  
 
0.906
LOC104595706
Cytochrome P450 90B1-like; Belongs to the cytochrome P450 family.
  
  
 
0.906
LOC104597895
Cytochrome P450 85A1-like; Belongs to the cytochrome P450 family.
  
  
 
0.906
LOC104599689
Cytochrome P450 85A-like; Belongs to the cytochrome P450 family.
  
  
 
0.906
LOC104601879
Cytochrome P450 90B1-like; Belongs to the cytochrome P450 family.
  
  
 
0.906
LOC104608289
Cytochrome P450 724B1-like; Belongs to the cytochrome P450 family.
  
  
 
0.906
LOC104595015
Cytochrome P450 90A1-like isoform X1; Belongs to the cytochrome P450 family.
  
  
 
0.904
LOC104601254
Cytochrome P450 90A1; Belongs to the cytochrome P450 family.
  
  
 
0.904
Your Current Organism:
Nelumbo nucifera
NCBI taxonomy Id: 4432
Other names: Indian lotus, N. nucifera, Nelumbo nucifera Gaertn., padma, sacred lotus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.