STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC104592036Probable glutamate carboxypeptidase 2. (780 aa)    
Predicted Functional Partners:
LOC104611719
Oxysterol-binding protein-related protein 4C; Belongs to the OSBP family.
   
 
  0.656
LOC104592356
Photosystem II stability/assembly factor HCF136, chloroplastic.
     
 0.627
LOC104605574
AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.
     
 0.580
LOC104605339
AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.
     
 0.580
LOC104587143
Protein LOL2 isoform X1.
     
 0.572
LOC104594182
E3 ubiquitin-protein ligase UPL5-like isoform X1.
    
 0.548
LOC104606557
E3 ubiquitin-protein ligase UPL5-like.
    
 0.548
LOC104600767
Calcium sensing receptor, chloroplastic.
     
 0.537
LOC104606469
AP-2 complex subunit mu-like; Belongs to the adaptor complexes medium subunit family.
     
 0.537
LOC104610374
AP-2 complex subunit mu; Belongs to the adaptor complexes medium subunit family.
     
 0.537
Your Current Organism:
Nelumbo nucifera
NCBI taxonomy Id: 4432
Other names: Indian lotus, N. nucifera, Nelumbo nucifera Gaertn., padma, sacred lotus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.