STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC1045910823-ketoacyl-CoA synthase 4-like. (105 aa)    
Predicted Functional Partners:
LOC104594555
Very-long-chain enoyl-CoA reductase.
    
 
 0.664
LOC104608818
Uncharacterized protein LOC104608818.
   
 0.649
LOC104586554
Uncharacterized protein LOC104586554 isoform X1.
   
 0.645
LOC104611912
Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase; Catalyzes the third of the four reactions of the long-chain fatty acids elongation cycle. This endoplasmic reticulum-bound enzymatic process, allows the addition of two carbons to the chain of long- and very long-chain fatty acids/VLCFAs per cycle. This enzyme catalyzes the dehydration of the 3-hydroxyacyl-CoA intermediate into trans-2,3-enoyl-CoA, within each cycle of fatty acid elongation. Thereby, it participates to the production of VLCFAs of different chain lengths that are involved in multiple biological processes as precursors [...]
    
 
 0.642
LOC104593003
Very-long-chain 3-oxoacyl-CoA reductase 1; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
    
 0.620
LOC104591581
Very-long-chain 3-oxoacyl-CoA reductase 1-like; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
    
 0.620
LOC104591635
Protein SIEL isoform X1.
   
 0.610
LOC104593558
Integrator complex subunit 9.
    
 0.587
LOC104598651
RNA polymerase II-associated protein 3.
   
 0.522
LOC104605091
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.
    
  0.498
Your Current Organism:
Nelumbo nucifera
NCBI taxonomy Id: 4432
Other names: Indian lotus, N. nucifera, Nelumbo nucifera Gaertn., padma, sacred lotus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.