STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC104591782Uncharacterized protein LOC104591782 isoform X1. (477 aa)    
Predicted Functional Partners:
LOC104591301
Uncharacterized protein LOC104591301.
    
 0.731
LOC104595148
Bark storage protein A.
    
 0.731
LOC104589393
Phenylalanine ammonia-lyase.
  
 
 0.702
LOC104595050
Phenylalanine ammonia-lyase.
  
 
 0.702
LOC104598388
Phenylalanine ammonia-lyase-like.
  
 
 0.702
LOC104600622
Phenylalanine ammonia-lyase.
  
 
 0.702
LOC104601277
Phenylalanine ammonia-lyase.
  
 
 0.702
LOC104589183
Uncharacterized protein LOC104589183.
    
 0.669
LOC104602989
Uncharacterized protein LOC104602989.
    
 0.669
LOC104590647
Abscisic-aldehyde oxidase-like isoform X1.
  
 
 0.654
Your Current Organism:
Nelumbo nucifera
NCBI taxonomy Id: 4432
Other names: Indian lotus, N. nucifera, Nelumbo nucifera Gaertn., padma, sacred lotus
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