STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC104592542Arogenate dehydrogenase 2, chloroplastic-like. (368 aa)    
Predicted Functional Partners:
LOC104588574
Histidinol-phosphate aminotransferase, chloroplastic isoform X1.
  
 
 0.990
LOC104605921
Bifunctional aspartate aminotransferase and glutamate/aspartate-prephenate aminotransferase-like.
   
 0.966
LOC104600083
Bifunctional aspartate aminotransferase and glutamate/aspartate-prephenate aminotransferase-like.
   
 0.964
LOC104592560
Probable aminotransferase TAT2 isoform X1.
    
 0.934
LOC104599456
Probable aminotransferase TAT2 isoform X1.
    
 0.934
LOC104608160
Probable aminotransferase TAT2.
    
 0.934
LOC104602632
Chorismate synthase.
  
 0.898
LOC104588317
Arogenate dehydratase/prephenate dehydratase 1, chloroplastic-like.
 
 
 0.896
LOC104587717
Arogenate dehydratase; Converts the prephenate produced from the shikimate- chorismate pathway into phenylalanine.
 
 
 0.867
LOC104594755
LOW QUALITY PROTEIN: arogenate dehydratase/prephenate dehydratase 2, chloroplastic.
 
 
 0.853
Your Current Organism:
Nelumbo nucifera
NCBI taxonomy Id: 4432
Other names: Indian lotus, N. nucifera, Nelumbo nucifera Gaertn., padma, sacred lotus
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