STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC104595000Gibberellin 2-beta-dioxygenase 8-like; Belongs to the iron/ascorbate-dependent oxidoreductase family. (350 aa)    
Predicted Functional Partners:
LOC104596232
Gibberellin 20 oxidase 1-D-like; Belongs to the iron/ascorbate-dependent oxidoreductase family.
  
  
 
0.914
LOC104608354
Gibberellin 20 oxidase 1; Belongs to the iron/ascorbate-dependent oxidoreductase family.
  
  
 
0.913
LOC104595272
Gibberellin 3-beta-dioxygenase 1-like; Belongs to the iron/ascorbate-dependent oxidoreductase family.
  
  
 
0.709
LOC104592309
Gibberellin 3-beta-dioxygenase 1-like; Belongs to the iron/ascorbate-dependent oxidoreductase family.
  
  
 
0.704
LOC104595273
Gibberellin 3-beta-dioxygenase 1-like; Belongs to the iron/ascorbate-dependent oxidoreductase family.
  
  
 
0.704
LOC104592306
Gibberellin 3-beta-dioxygenase 1-like; Belongs to the iron/ascorbate-dependent oxidoreductase family.
  
  
 
0.702
LOC104595848
Ent-kaurene oxidase, chloroplastic; Belongs to the cytochrome P450 family.
      
 0.572
LOC104599747
Ent-kaur-16-ene synthase, chloroplastic isoform X1.
      
 0.571
LOC104600585
Cytokinin dehydrogenase 7.
      
 0.561
LOC104610070
Methyltransferase-like protein; Belongs to the methyltransferase superfamily. METL family.
      
 0.548
Your Current Organism:
Nelumbo nucifera
NCBI taxonomy Id: 4432
Other names: Indian lotus, N. nucifera, Nelumbo nucifera Gaertn., padma, sacred lotus
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