STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC104595431Alpha-dioxygenase 1-like. (642 aa)    
Predicted Functional Partners:
LOC104587776
Alpha-dioxygenase 2.
  
  
 
0.901
LOC104595421
Alpha-dioxygenase 1-like.
  
  
 
0.900
LOC104598692
Phospholipase A(1) DAD1, chloroplastic-like.
     
  0.900
LOC104601567
Phospholipase A2-alpha-like isoform X1.
     
  0.900
LOC104601566
Phospholipase A2-alpha-like.
     
  0.900
LOC104608865
Triacylglycerol lipase SDP1-like.
     
  0.900
LOC104610502
Phospholipase A(1) DAD1, chloroplastic-like.
     
  0.900
LOC104610980
Lecithin-cholesterol acyltransferase-like 4.
     
 0.900
LOC104612009
Triacylglycerol lipase SDP1-like.
     
  0.900
LOC104591662
Lipoxygenase; Plant lipoxygenase may be involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence or responses to wounding.
    
 0.716
Your Current Organism:
Nelumbo nucifera
NCBI taxonomy Id: 4432
Other names: Indian lotus, N. nucifera, Nelumbo nucifera Gaertn., padma, sacred lotus
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