STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC10460322950S ribosomal protein L35; Belongs to the bacterial ribosomal protein bL35 family. (147 aa)    
Predicted Functional Partners:
LOC104593590
50S ribosomal protein 5, chloroplastic.
   
   0.896
LOC104609932
50S ribosomal protein L15, chloroplastic.
   
   0.847
LOC104604573
50S ribosomal protein L9, chloroplastic.
  
 
 0.833
rpl33
50S ribosomal protein L33, chloroplastic.
    
   0.829
LOC104600937
50S ribosomal protein L28, chloroplastic.
   
 
 0.828
LOC104592876
50S ribosomal protein L27, chloroplastic.
  
 
 0.824
LOC104608166
30S ribosomal protein S20, chloroplastic.
   
 
 0.810
LOC104601596
Uncharacterized protein LOC104601596; Belongs to the bacterial ribosomal protein bL17 family.
   
 
 0.806
LOC104602028
50S ribosomal protein L15, chloroplastic-like.
   
   0.776
LOC104593315
50S ribosomal protein L11, chloroplastic isoform X1; Belongs to the universal ribosomal protein uL11 family.
   
 
 0.769
Your Current Organism:
Nelumbo nucifera
NCBI taxonomy Id: 4432
Other names: Indian lotus, N. nucifera, Nelumbo nucifera Gaertn., padma, sacred lotus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.