STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC104609351Vacuolar protein sorting-associated protein 2 homolog 1. (223 aa)    
Predicted Functional Partners:
LOC104587368
Vacuolar protein sorting-associated protein 24 homolog 1-like.
   
0.931
LOC104604533
Vacuolar protein sorting-associated protein 24 homolog 1-like.
   
0.931
LOC104606671
Vacuolar protein sorting-associated protein 20 homolog 2.
   
 0.918
LOC104588221
Vacuolar protein sorting-associated protein 32 homolog 2.
   
 0.912
LOC104604451
Vacuolar protein sorting-associated protein 32 homolog 2-like.
   
 0.912
LOC104605343
Vacuolar protein sorting-associated protein; Component of the endosomal sorting complex required for transport II (ESCRT-II), which is required for multivesicular body (MVB) formation and sorting of endosomal cargo proteins into MVBs. Belongs to the SNF8 family.
   
 0.870
LOC104587803
Vacuolar protein sorting-associated protein 36 isoform X1.
    
 0.861
LOC104585580
Charged multivesicular body protein 7 isoform X1.
    
 0.860
LOC104605673
Vacuolar protein sorting-associated protein 28 homolog; Component of the ESCRT-I complex (endosomal sorting complex required for transport I), a regulator of vesicular trafficking process.
   
 0.815
LOC104612603
Vacuolar protein sorting-associated protein 28 homolog; Component of the ESCRT-I complex (endosomal sorting complex required for transport I), a regulator of vesicular trafficking process.
   
 0.815
Your Current Organism:
Nelumbo nucifera
NCBI taxonomy Id: 4432
Other names: Indian lotus, N. nucifera, Nelumbo nucifera Gaertn., padma, sacred lotus
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