STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC1046082303-deoxy-manno-octulosonate cytidylyltransferase, mitochondrial-like. (298 aa)    
Predicted Functional Partners:
LOC104608399
2-dehydro-3-deoxyphosphooctonate aldolase.
 
  
 0.932
LOC104587137
3-deoxy-manno-octulosonate cytidylyltransferase, mitochondrial-like.
  
  
 
0.900
LOC104600757
Probable acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase, mitochondrial.
 
   
 0.795
LOC104587459
Probable 3-deoxy-D-manno-octulosonic acid transferase, mitochondrial isoform X1.
 
   
 0.790
LOC104608094
Probable UDP-3-O-acyl-N-acetylglucosamine deacetylase 2 isoform X1.
 
   
 0.786
LOC104585687
Probable UDP-3-O-acylglucosamine N-acyltransferase 2, mitochondrial isoform X1.
 
   
 0.783
LOC104589997
Probable arabinose 5-phosphate isomerase; Belongs to the SIS family. GutQ/KpsF subfamily.
  
   
 0.625
LOC104600887
Probable arabinose 5-phosphate isomerase.
  
   
 0.625
LOC104606144
Translocator protein homolog.
      
 0.550
LOC104603275
Photosynthetic NDH subunit of subcomplex B 1, chloroplastic.
     
 0.537
Your Current Organism:
Nelumbo nucifera
NCBI taxonomy Id: 4432
Other names: Indian lotus, N. nucifera, Nelumbo nucifera Gaertn., padma, sacred lotus
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.