STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC104612364Zinc phosphodiesterase ELAC protein 2-like isoform X1. (1012 aa)    
Predicted Functional Partners:
LOC104586989
Nuclear ribonuclease Z isoform X1.
     
 0.954
LOC104606536
Ribonuclease Z, chloroplastic.
     
 0.925
LOC104598508
Uncharacterized protein LOC104598508.
   
   0.829
LOC104602358
Uncharacterized protein LOC104602358 isoform X1.
   
   0.829
LOC104610510
Uncharacterized protein LOC104610510 isoform X1.
   
   0.829
LOC104592361
Periodic tryptophan protein 2 homolog.
   
    0.661
LOC104585639
Transducin beta-like protein 3.
   
    0.653
LOC104598334
tRNA (adenine(58)-N(1))-methyltransferase.
  
  
 0.644
LOC104596586
ATP-dependent RNA helicase SUV3, mitochondrial isoform X1.
   
  
 0.628
LOC104598146
DExH-box ATP-dependent RNA helicase DExH18, mitochondrial isoform X1.
   
  
 0.628
Your Current Organism:
Nelumbo nucifera
NCBI taxonomy Id: 4432
Other names: Indian lotus, N. nucifera, Nelumbo nucifera Gaertn., padma, sacred lotus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.