STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC104611564Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily. (469 aa)    
Predicted Functional Partners:
LOC104586172
Phosphoglucan phosphatase DSP4, amyloplastic-like.
    
 0.651
LOC104587213
Phosphoglucan phosphatase LSF1, chloroplastic isoform X1.
    
 0.651
LOC104604611
Phosphoglucan phosphatase DSP4, amyloplastic isoform X1.
    
 0.651
LOC104592113
Protein phosphatase 2C and cyclic nucleotide-binding/kinase domain-containing protein isoform X1.
   
0.496
LOC104597826
Uncharacterized N-acetyltransferase ycf52.
      
 0.447
LOC104604470
Probable serine/threonine-protein kinase vps15 isoform X1.
    
 0.444
LOC104600368
Beclin-1-like protein.
    
 0.442
LOC104590521
Protein LST8 homolog isoform X1.
    
 0.435
LOC104606043
Phosphatidylinositol 3-kinase, root isoform isoform X1; Belongs to the PI3/PI4-kinase family.
    
 0.434
LOC104594834
LOW QUALITY PROTEIN: serine/threonine-protein kinase GRIK1; Belongs to the protein kinase superfamily.
  
 
0.434
Your Current Organism:
Nelumbo nucifera
NCBI taxonomy Id: 4432
Other names: Indian lotus, N. nucifera, Nelumbo nucifera Gaertn., padma, sacred lotus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.