STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC104612755Peroxisomal membrane protein PMP22-like; Belongs to the peroxisomal membrane protein PXMP2/4 family. (185 aa)    
Predicted Functional Partners:
LOC104596205
Peroxisomal membrane protein PEX16.
     
 0.708
LOC104600595
Peroxisome biogenesis factor 10.
     
 0.614
LOC104590675
Uncharacterized protein LOC104590675 isoform X1.
      
 0.565
LOC104601441
Peroxisome biogenesis protein 5.
     
 0.522
LOC104598523
Peroxisome biogenesis protein 19-2-like isoform X1.
    
 0.516
LOC104602348
Peroxisome biogenesis protein 19-2-like.
    
 0.516
LOC104602793
Peroxisome biogenesis protein 12; Required for peroxisome biogenesis and for PTS1- and PTS2- dependent protein import into peroxisomes. Belongs to the pex2/pex10/pex12 family.
     
 0.473
LOC104587760
Peroxisome biogenesis protein 3-2-like.
   
 
 0.470
LOC104596334
Peroxisome biogenesis protein 3-2-like.
   
 
 0.470
LOC104611645
Protein SYM1; Belongs to the peroxisomal membrane protein PXMP2/4 family.
  
   
0.463
Your Current Organism:
Nelumbo nucifera
NCBI taxonomy Id: 4432
Other names: Indian lotus, N. nucifera, Nelumbo nucifera Gaertn., padma, sacred lotus
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