STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC104610510Uncharacterized protein LOC104610510 isoform X1. (302 aa)    
Predicted Functional Partners:
LOC104612364
Zinc phosphodiesterase ELAC protein 2-like isoform X1.
   
   0.829
LOC104606536
Ribonuclease Z, chloroplastic.
   
   0.643
LOC104586989
Nuclear ribonuclease Z isoform X1.
   
   0.643
LOC104608825
Mitochondrial fission 1 protein; Component of the peroxisomal and mitochondrial division machineries. Plays a role in promoting the fission of mitochondria and peroxisomes.
   
  
 0.579
LOC104605850
Dynamin-like protein ARC5 isoform X1; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.
      
 0.569
LOC104609226
Dynamin-related protein 1C; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.
      
 0.566
LOC104596469
Probable transmembrane GTPase FZO-like, chloroplastic isoform X1.
      
 0.531
LOC104593279
NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial-like.
   
    0.519
LOC104591674
NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial; Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain.
   
    0.519
LOC104601489
NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial-like.
   
    0.519
Your Current Organism:
Nelumbo nucifera
NCBI taxonomy Id: 4432
Other names: Indian lotus, N. nucifera, Nelumbo nucifera Gaertn., padma, sacred lotus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.