STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC104612482Uncharacterized protein LOC104612482. (709 aa)    
Predicted Functional Partners:
LOC104585866
30-kDa cleavage and polyadenylation specificity factor 30.
     
  0.900
LOC104596063
Cleavage and polyadenylation specificity factor subunit 2.
     
  0.800
LOC104611855
Cleavage and polyadenylation specificity factor subunit 1.
     
  0.800
LOC104610329
Cleavage and polyadenylation specificity factor subunit 3-I.
     
  0.800
LOC104593120
WD repeat-containing protein 82.
     
  0.650
LOC104597075
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
     
  0.650
LOC104599549
WD repeat-containing protein 82-B isoform X1.
     
  0.650
LOC104599551
RNA polymerase II subunit A C-terminal domain phosphatase SSU72.
     
  0.650
LOC104598919
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
     
  0.650
LOC104600239
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
     
  0.650
Your Current Organism:
Nelumbo nucifera
NCBI taxonomy Id: 4432
Other names: Indian lotus, N. nucifera, Nelumbo nucifera Gaertn., padma, sacred lotus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.