STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC109114106Uncharacterized protein LOC109114106. (181 aa)    
Predicted Functional Partners:
LOC109114314
Uncharacterized protein LOC109114314.
  
     0.529
LOC104593283
Uncharacterized protein LOC104593283.
  
     0.527
LOC109115568
Uncharacterized protein LOC109115568.
  
     0.516
LOC104590130
Uncharacterized protein LOC104590130.
 
     0.511
LOC109114647
Uncharacterized protein LOC109114647.
  
     0.509
LOC109115086
Uncharacterized protein LOC109115086.
  
     0.505
LOC109114178
Uncharacterized protein LOC109114178.
 
     0.504
LOC109115574
Uncharacterized protein LOC109115574.
  
     0.504
LOC104600803
Uncharacterized protein LOC104600803.
  
     0.491
LOC109114099
Uncharacterized protein LOC109114099.
  
     0.487
Your Current Organism:
Nelumbo nucifera
NCBI taxonomy Id: 4432
Other names: Indian lotus, N. nucifera, Nelumbo nucifera Gaertn., padma, sacred lotus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.